RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ARHGDIGQ99819 225 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.91□□□□□ -0.348e-15■■■■■ 32
SCAF4-202ENST00000399804 RNF167Q9H6Y7 350 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 ING3Q9NXR8 418 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 PADI1Q9ULC6 663 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 TMED7Q9Y3B3 224 aa12.91□□□□□ -0.34
SCAF4-202ENST00000399804 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 G3V3Y1 287 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 RPS25P62851 125 aaKnown RBP12.9□□□□□ -0.34
SCAF4-202ENST00000399804 KIRREL2Q6UWL6 708 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 UEVLDQ8IX04 471 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 OR14L1PQ8NHC6 308 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 RASD2Q96D21 266 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 MED11Q9P086 117 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 CES1P1Q9UKY3 287 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ADAM18Q9Y3Q7 739 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 SULT2B1O00204 365 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ZGLP1P0C6A0 271 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ETV5P41161 510 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 HTR3AP46098 478 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ETV1P50549 477 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 PRKXP51817 358 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 POU3F1Q03052 451 aaPredicted RBP12.9□□□□□ -0.34
SCAF4-202ENST00000399804 C6orf183Q5T699 404 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ABHD17BQ5VST6 288 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF627Q7L945 461 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 TMEM52Q8NDY8 209 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ALG12Q9BV10 488 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF221Q9UK13 617 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 CYR61O00622 381 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 GALK2Q01415 458 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 ZNF181Q2M3W8 571 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 CCBE1Q6UXH8 406 aaPredicted RBP12.9□□□□□ -0.34
SCAF4-202ENST00000399804 PNPLA2Q96AD5 504 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 TEAD3Q99594 435 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 CDCA4Q9BXL8 241 aa12.9□□□□□ -0.34
SCAF4-202ENST00000399804 AK6Q9Y3D8 172 aaKnown RBP12.9□□□□□ -0.34
SCAF4-202ENST00000399804 A0A1B0GVI7 797 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 ISPDA4D126 451 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 ICOSLGO75144 302 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 CBX7O95931 251 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 CD40LGP29965 261 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 TGFBR1P36897 503 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 POLR2HP52434 150 aaKnown RBP12.9□□□□□ -0.35
SCAF4-202ENST00000399804 GLO1Q04760 184 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 ZFP69Q49AA0 526 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF517Q6ZMY9 492 aaPredicted RBP12.9□□□□□ -0.35
SCAF4-202ENST00000399804 KDM8Q8N371 416 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 MEIOBQ8N635 442 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF283Q8N7M2 679 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.35
SCAF4-202ENST00000399804 CCDC74BQ96LY2 380 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 LDAHQ9H6V9 325 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 NXT1Q9UKK6 140 aaKnown RBP12.9□□□□□ -0.35
SCAF4-202ENST00000399804 SCN2AQ99250 2005 aa12.9□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM72A0PK05 275 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 GCM2O75603 506 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 MAS1P04201 325 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 CRABP1P29762 137 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TNFSF8P32971 234 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 RBM34P42696 430 aaKnown RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 PLK5Q496M5 336 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 PDSS1Q5T2R2 415 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 DPY19L2P2Q6ZN68 376 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 HDDC2Q7Z4H3 204 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF101Q8IZC7 436 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 NANOGP1Q8N7R0 232 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 BBS1Q8NFJ9 593 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 SCARF2Q96GP6 870 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 DMRTB1Q96MA1 342 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 WDR77Q9BQA1 342 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 C2orf42Q9NWW7 574 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 COL4A6Q14031 1691 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 C4orf51C9J302 202 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 MEN1O00255 615 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 PRICKLE3O43900 615 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 OR7A10O76100 309 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 WNT1P04628 370 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 XAF1Q6GPH4 301 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 OR5AK2Q8NH90 309 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 ANKRD9Q96BM1 317 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 NUDT9Q9BW91 350 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 INPP5EQ9NRR6 644 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TXNL4BQ9NX01 149 aaKnown RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 NOTCH4Q99466 2003 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 GABRPO00591 440 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 IFNA6P05013 189 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 PIPP12273 146 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TCN2P20062 427 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TEKQ02763 1124 aa12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TMEM176BQ3YBM2 270 aaPredicted RBP12.89□□□□□ -0.35
SCAF4-202ENST00000399804 TRAV36DV7A0A075B6V5 113 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 SLC19A2O60779 497 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
SCAF4-202ENST00000399804 ZNF227Q86WZ6 799 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 MED28Q9H204 178 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 DHDHQ9UQ10 334 aa12.88□□□□□ -0.35
SCAF4-202ENST00000399804 SLC6A5Q9Y345 797 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms