RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 NR4A2P43354 598 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 HTR3AP46098 478 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 MAP2K6P52564 334 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PRPS1P60891 318 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 HBA1P69905 142 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PHC1P78364 1004 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 SPOCK1Q08629 439 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PTGR1Q14914 329 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PCLAFQ15004 111 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 XKR7Q5GH72 579 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 FAM120AOSQ5T036 256 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 GRINAQ7Z429 371 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 ADGRG3Q86Y34 549 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 CCDC103Q8IW40 242 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 KRTCAP2Q8N6L1 136 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 ARIH2OSQ8N7S6 290 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 FAM71CQ8NEG0 241 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 OR5D16Q8NGK9 328 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF563Q8TA94 476 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 MIPOL1Q8TD10 442 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 HTRA1Q92743 480 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 BOD1Q96IK1 185 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 ARL5BQ96KC2 179 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 C16orf45Q96MC5 204 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 NAA11Q9BSU3 229 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 DUSP26Q9BV47 211 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 LIN7BQ9HAP6 207 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 NPHS2Q9NP85 383 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 MYOZ1Q9NP98 299 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 SLC17A5Q9NRA2 495 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 CTPS2Q9NRF8 586 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 POLE3Q9NRF9 147 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 TMEM181Q9P2C4 612 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 UPB1Q9UBR1 384 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 FBXO9Q9UK97 447 aaPredicted RBP7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PRDM4Q9UKN5 801 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 PCDHGB4Q9UN71 923 aa7.66□□□□□ -1.18
CAPN3-208ENST00000397204 TMEM233B4DJY2 109 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF208O43345 1280 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 WNT11O96014 354 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 CHRNGP07510 517 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 APEHP13798 732 aaKnown RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF16P17020 682 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 IGFBP5P24593 272 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MPGP29372 298 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 RYKP34925 604 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 YLPM1P49750 1951 aaKnown RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FOXG1P55316 489 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 CLDN8P56748 225 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 OR2B6P58173 313 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 SLC35A1P78382 337 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 KCNJ10P78508 379 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MAD2L1Q13257 205 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MAPK14Q16539 360 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MGAM2Q2M2H8 2515 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 SMU1Q2TAY7 513 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MST1LQ2TV78 715 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 ATAD3BQ5T9A4 648 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 C16orf62Q7Z3J2 963 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 EIF1ADQ8N9N8 165 aaKnown RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FNDC5Q8NAU1 212 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 OR52E4Q8NGH9 312 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 OR5AK3PQ8NH89 298 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 XAGE5Q8WWM1 108 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 MSI2Q96DH6 328 aaKnown RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FBXO17Q96EF6 278 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FOXN4Q96NZ1 517 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 PIMREGQ9BSJ6 248 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 ZNF350Q9GZX5 532 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 PIF1Q9H611 641 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 OBP2BQ9NPH6 170 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 EXOSC3Q9NQT5 275 aaKnown RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 SLC7A10Q9NS82 523 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.65□□□□□ -1.18
CAPN3-208ENST00000397204 TENM1Q9UKZ4 2725 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 SLC9A8Q9Y2E8 581 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 WDR45Q9Y484 360 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FLVCR1Q9Y5Y0 555 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 FKBP7Q9Y680 259 aa7.65□□□□□ -1.18
CAPN3-208ENST00000397204 CENPVL1A0A0U1RR11 272 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 PRSS51A0A1B0GVH4 220 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 B9A039 149 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 RNASET2O00584 256 aaKnown RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TGFAP01135 160 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 PGRP06401 933 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ZNF23P17027 643 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 ALDH3A1P30838 453 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SERPINB5P36952 375 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SERPINF1P36955 418 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 IDH2P48735 452 aaKnown RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 RPS26P62854 115 aaKnown RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 EMX2Q04743 252 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 GGTLC2Q14390 218 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 SLC17A1Q14916 467 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 PGS1Q32NB8 556 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 GLIPR1L2Q4G1C9 344 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TSPO2Q5TGU0 170 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 TYW3Q6IPR3 259 aaKnown RBP7.64□□□□□ -1.19
CAPN3-208ENST00000397204 EMBQ6PCB8 327 aa7.64□□□□□ -1.19
CAPN3-208ENST00000397204 KLHL24Q6TFL4 600 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms