RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 ADRB1P08588 477 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 APEHP13798 732 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 CD46P15529 392 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 NME2P22392 152 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 EIF2S3P41091 472 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 ID4P47928 161 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 DNASE1L1P49184 302 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 ST13P50502 369 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 IL5RAQ01344 420 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 LTBQ06643 244 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 SELENBP1Q13228 472 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 TMEM201Q5SNT2 666 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 ACSM5Q6NUN0 579 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 CASP12Q6UXS9 341 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 MEX3DQ86XN8 651 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 P3H2Q8IVL5 708 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 LNX2Q8N448 690 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 FAM26EQ8N5C1 309 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 FDCSPQ8NFU4 85 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 OR2M7Q8NG81 312 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 OR52L1Q8NGH7 329 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 FAM81AQ8TBF8 368 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 SAMD8Q96LT4 415 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 TNFRSF13CQ96RJ3 184 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 CCDC86Q9H6F5 360 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 IMPAD1Q9NX62 359 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 QPCTLQ9NXS2 382 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF226Q9NYT6 803 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 RNF6Q9Y252 685 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 VDAC3Q9Y277 283 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 PCDHGA9Q9Y5G4 932 aaKnown RBP12.3□□□□□ -0.44
MCF2L-209ENST00000397036 CORINQ9Y5Q5 1042 aa12.3□□□□□ -0.44
MCF2L-209ENST00000397036 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 A6NL46 340 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 BHLHE40O14503 412 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 ARPC3O15145 178 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 WISP1O95388 367 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 AHSA1O95433 338 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 HK1P19367 917 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 SLC6A6P31641 620 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 GRK5P34947 590 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 CTU2Q2VPK5 515 aaKnown RBP12.29□□□□□ -0.44
MCF2L-209ENST00000397036 PGGHGQ32M88 737 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 TMEM236Q5W0B7 351 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 LAIR2Q6ISS4 152 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 C3orf33Q6P1S2 294 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 IGFL3Q6UXB1 125 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 DPY19L2P2Q6ZN68 376 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 MAMDC2Q7Z304 686 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-209ENST00000397036 OR13C2Q8NGS9 318 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 FANK1Q8TC84 345 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 SLC38A2Q96QD8 506 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 PIGQQ9BRB3 760 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 OR2B2Q9GZK3 357 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 NDEL1Q9GZM8 345 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 TBC1D23Q9NUY8 699 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 TUBA8Q9NY65 449 aaPredicted RBP12.29□□□□□ -0.44
MCF2L-209ENST00000397036 PLA2G3Q9NZ20 509 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 HDGFL3Q9Y3E1 203 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 PCDHGB7Q9Y5F8 929 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 CPAMD8Q8IZJ3 1885 aa12.29□□□□□ -0.44
MCF2L-209ENST00000397036 ZC3H12DA2A288 527 aaKnown RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 FTCDNL1E5RQL4 147 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 RRP8O43159 456 aaKnown RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 MRPS14O60783 128 aaKnown RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 WBP4O75554 376 aaKnown RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 HIST1H2ABP04908 130 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 PEPDP12955 493 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 UQCRC1P31930 480 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 PCYT1AP49585 367 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 TNFSF10P50591 281 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 SGCBQ16585 318 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 OCLNQ16625 522 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 SYT14P1Q58G82 188 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 MEDAGQ5VYS4 303 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 CCDC81Q6ZN84 652 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 PTCHD4Q6ZW05 846 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 HIST3H2AQ7L7L0 130 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 SULF2Q8IWU5 870 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 SPACA3Q8IXA5 215 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 ZNF786Q8N393 782 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 SCAIQ8N9R8 606 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 ZFP62Q8NB50 900 aaPredicted RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 TMEM178AQ8NBL3 297 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 OR51A7Q8NH64 312 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 HIST1H2ACQ93077 130 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 UBE2FQ969M7 185 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 FAM122AQ96E09 287 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 C5orf34Q96MH7 638 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 Q96MT0 163 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 MOGAT1Q96PD6 335 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 NPAS1Q99742 590 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 MRPL39Q9NYK5 338 aaKnown RBP12.28□□□□□ -0.44
MCF2L-209ENST00000397036 B4GALT7Q9UBV7 327 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 DKKL1Q9UK85 242 aa12.28□□□□□ -0.44
MCF2L-209ENST00000397036 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms