RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LAX1Q8IWV1 398 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 WDTC1Q8N5D0 677 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 CD200R1Q8TD46 325 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 DUSP19Q8WTR2 217 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 NUP98P52948 1817 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 KDM4EB2RXH2 506 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-202ENST00000396578 BET1O15155 118 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 FRS3O43559 492 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 ANGPTL7O43827 346 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 SLC43A2Q8N370 569 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 BLACEA4D250 179 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 ANTXRLA6NF34 631 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 FAM183AA6NL82 134 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 CCL5P13501 91 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 GABRA2P47869 451 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 OR1Q1Q15612 314 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 LRRC56Q8IYG6 542 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-202ENST00000396578 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 OR1S2Q8NGQ3 325 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 LMO3Q8TAP4 145 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 RAB3CQ96E17 227 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 ACPTQ9BZG2 426 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 GALNT9Q9HCQ5 603 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 GPR160Q9UJ42 338 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 SNED1Q8TER0 1413 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 FOXE1O00358 373 aaPredicted RBP13.07□□□□□ -0.32
COL4A3-202ENST00000396578 UBE2G2P60604 165 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 TAGLNQ01995 201 aaKnown RBP13.07□□□□□ -0.32
COL4A3-202ENST00000396578 CATR1Q13166 79 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 STK11Q15831 433 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 OBP2BQ9NPH6 170 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL4A3-202ENST00000396578 ACAD8Q9UKU7 415 aa13.07□□□□□ -0.32
COL4A3-202ENST00000396578 LRIT2A6NDA9 550 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SGK494L7N484 410 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ANXA7P20073 488 aaKnown RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ECI1P42126 302 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 PSMB3P49720 205 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 RUNX2Q13950 521 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 HIST2H3AQ71DI3 136 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 OR4A16Q8NH70 328 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 HPSE2Q8WWQ2 592 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SORT1Q99523 831 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SPATA6Q9NWH7 488 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SEC14L6B5MCN3 397 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 PPP1R2P9O14990 202 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 F3P13726 295 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SDC1P18827 310 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF280AP59817 542 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF542PQ5EBM4 170 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 LPCAT3Q6P1A2 487 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 NRARPQ7Z6K4 114 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 TGIF2Q9GZN2 237 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 EMC7Q9NPA0 242 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SLC16A7O60669 478 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 AADACP22760 399 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 TRHRP34981 398 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ACOT4Q8N9L9 421 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 PCDHB10Q9UN67 800 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 MED16Q9Y2X0 877 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 HNRNPA1P09651 372 aaKnown RBP eCLIP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 FOLR3P41439 243 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 GTDC1Q4AE62 458 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF684Q5T5D7 378 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF765Q7L2R6 523 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 OR5AR1Q8NGP9 310 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 SGPP1Q9BX95 441 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 METTL9Q9H1A3 318 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 A0A0J9YY10 115 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 BTBD17A6NE02 478 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 DEFB110Q30KQ9 67 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 PHYHD1Q5SRE7 291 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 RTP4Q96DX8 246 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 MED30Q96HR3 178 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ZNF582Q96NG8 517 aaPredicted RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 CRB3Q9BUF7 120 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 NME2P22392 152 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 TRA2BP62995 288 aaKnown RBP13.06□□□□□ -0.32
COL4A3-202ENST00000396578 ACSM1Q08AH1 577 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 CAMK2BQ13554 666 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 NEIL2Q969S2 332 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 OR14J1Q9UGF5 321 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 GPR45Q9Y5Y3 372 aa13.06□□□□□ -0.32
COL4A3-202ENST00000396578 H7C1Q1 480 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CBR1P16152 277 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 HOXD11P31277 338 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 FOXA1P55317 472 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 PDZD3Q86UT5 571 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 MCATQ8IVS2 390 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 LRRC18Q8N456 261 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 CLMPQ9H6B4 373 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 EXO1Q9UQ84 846 aaKnown RBP13.05□□□□□ -0.32
COL4A3-202ENST00000396578 ETV7Q9Y603 341 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 NPIPA5A0A0B4J1W7 369 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 GABRR3A8MPY1 467 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 NPIPA7E9PJI5 369 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 K7ERQ8 282 aa13.05□□□□□ -0.32
COL4A3-202ENST00000396578 LDB3O75112 727 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms