RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 UMODP07911 640 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NGFRP08138 427 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CELA2AP08217 269 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IGHV4-31P0DP07 118 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 DPEP1P16444 411 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IFNA8P32881 189 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PCK1P35558 622 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SLC1A1P43005 524 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 MAGEA6P43360 314 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GPR1P46091 355 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CSNK1A1P48729 337 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CX3CR1P49238 355 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TMED10P49755 219 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ATP6V0D1P61421 351 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 RPS15AP62244 130 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 RPS6P62753 249 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IL9RQ01113 521 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PAX2Q02962 417 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GLO1Q04760 184 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF33AQ06730 810 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ITPK1Q13572 414 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SGCAQ16586 387 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GOLGA7BQ2TAP0 167 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ADNP2Q6IQ32 1131 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PRMT9Q6P2P2 845 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TTC33Q6PID6 262 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CCNI2Q6ZMN8 369 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 C1QL2Q7Z5L3 287 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF554Q86TJ5 538 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZBED8Q8IZ13 594 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 LSMEM2Q8N112 164 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CDRT4Q8N9R6 151 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NECAP1Q8NC96 275 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 OR4D9Q8NGE8 314 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ABTB1Q969K4 478 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 BIRC7Q96CA5 298 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CAPNS2Q96L46 248 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CPXM1Q96SM3 734 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ATP5SQ99766 215 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 HSD17B14Q9BPX1 270 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NIPSNAP3BQ9BS92 247 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SIRT7Q9NRC8 400 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TUBGCP4Q9UGJ1 667 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 EXOSC1Q9Y3B2 195 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SAMHD1Q9Y3Z3 626 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 FADS3Q9Y5Q0 445 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CDH10Q9Y6N8 788 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 URB2Q14146 1524 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PBRM1Q86U86 1689 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 JCADQ9P266 1359 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 LOC101059948A0A1B0GTJ6 334 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 BCLAF3A2AJT9 711 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 BLOC1S5-TXNDC5H3BN57 136 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NDUFAB1O14561 156 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 C1orf105O95561 183 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 FGF19O95750 216 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ACTL6AO96019 429 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IGHG4P01861 327 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 KLK1P06870 262 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CD3GP09693 182 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 FAM157CP0CG43 387 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SLC35E2BP0CK96 405 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GATA1P15976 413 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 NBL1P41271 181 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CBX5P45973 191 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CRISP1P54107 249 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GAS1P54826 345 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 XGP55808 180 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 UBE2KP61086 200 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PITPNAQ00169 270 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SLC10A2Q12908 348 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ZNF268Q14587 947 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 RPEL1Q2QD12 228 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 QRICH1Q2TAL8 776 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GTDC1Q4AE62 458 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PAN3Q58A45 887 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 DCAF10Q5QP82 559 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PPM1LQ5SGD2 360 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SUMO4Q6EEV6 95 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ADAM5Q6NVV9 412 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 APTXQ7Z2E3 356 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 AKAP14Q86UN6 197 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CRLF3Q8IUI8 442 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 FUNDC1Q8IVP5 155 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 RNF113BQ8IZP6 322 aaKnown RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 IQCKQ8N0W5 287 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 SLC39A11Q8N1S5 342 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 MS4A15Q8N5U1 240 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TCEANCQ8N8B7 351 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TMEM174Q8WUU8 243 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 ESR2Q92731 530 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 CXorf40BQ96DE9 158 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 TXNDC15Q96J42 360 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 OR51V1Q9H2C8 321 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 PIGUQ9H490 435 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 BEX1Q9HBH7 125 aa4.29□□□□□ -1.72
GABPB1-204ENST00000396464 C3orf14Q9HBI5 128 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms