RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 TEX44Q53QW1 395 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 PMF1Q6P1K2 205 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF600Q6ZNG1 722 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 FBXO16Q8IX29 292 aaPredicted RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF683Q8IZ20 524 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 CLDN19Q8N6F1 224 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 POM121L12Q8N7R1 296 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 SYT14Q8NB59 555 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 MAPK1IP1LQ8NDC0 245 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 TFB1MQ8WVM0 346 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ARNTL2Q8WYA1 636 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 FAM3CQ92520 227 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 SLC6A7Q99884 636 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 TM2D1Q9BX74 207 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 CRNKL1Q9BZJ0 848 aaKnown RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 VCX2Q9H322 139 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 EHFQ9NZC4 300 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 C6orf203Q9P0P8 240 aaPredicted RBP4.38□□□□□ -1.71
CDKN3-203ENST00000395577 MAD1L1Q9Y6D9 718 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 IKBKGQ9Y6K9 419 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 KMT2EQ8IZD2 1858 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 ATRXP46100 2492 aa4.38□□□□□ -1.71
CDKN3-203ENST00000395577 MAP1BP46821 2468 aaKnown RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 FASNP49327 2511 aaKnown RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SAGE2PA6NJ88 616 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 HAS3O00219 553 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 TPST2O60704 377 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 RHBDL1O75783 438 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 HPP00738 406 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 PGCP20142 388 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SHC1P29353 583 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 HPCAL1P37235 193 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 PTGER3P43115 390 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 RPL34P49207 117 aaKnown RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 VEGFCP49767 419 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 IST1P53990 364 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 RND3P61587 244 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF154Q13106 437 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 RIPK1Q13546 671 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SLC22A6Q4U2R8 563 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 C10orf120Q5SQS8 335 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 KCNIP4Q6PIL6 250 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 GSG1LQ6UXU4 331 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 APTXQ7Z2E3 356 aaKnown RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 MCOLN2Q8IZK6 566 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 LINC01561Q8N1V8 128 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 ZCCHC7Q8N3Z6 543 aaKnown RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 STXBP6Q8NFX7 210 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 OR2T33Q8NG76 320 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 VN1R17PQ8TDU5 208 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 IL1F10Q8WWZ1 152 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SH3YL1Q96HL8 342 aaPredicted RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 C12orf66Q96MD2 445 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 CCT7Q99832 543 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 DUSP16Q9BY84 665 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 OPN3Q9H1Y3 402 aaPredicted RBP4.37□□□□□ -1.71
CDKN3-203ENST00000395577 CUTCQ9NTM9 273 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 COX16Q9P0S2 106 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 SLC2A6Q9UGQ3 507 aa4.37□□□□□ -1.71
CDKN3-203ENST00000395577 MICAL3Q7RTP6 2002 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 BAHCC1Q9P281 2608 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 ANKRD11Q6UB99 2663 aaPredicted RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 METTL21EPA6NDL7 271 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 C5orf67F2Z3F1 127 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 SNNO75324 88 aaPredicted RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 SLC2A10O95528 541 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 LAMP1P11279 417 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PTBP1P26599 531 aaKnown RBP eCLIP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 AP3M2P53677 418 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 OTUD4Q01804 1114 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PDK3Q15120 406 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 FAM120AOSQ5T036 256 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 TMEM225Q6GV28 225 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 DEFB128Q7Z7B8 93 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF679Q8IYX0 411 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 EIF1ADQ8N9N8 165 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 ADAMTS16Q8TE57 1224 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 AENQ8WTP8 325 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 TRUB1Q8WWH5 349 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 SHC3Q92529 594 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 N4BP2L2Q92802 583 aaPredicted RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 EMG1Q92979 244 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 TMEM80Q96HE8 168 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PPP1R16AQ96I34 528 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 AMDHD1Q96NU7 426 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PSKH2Q96QS6 385 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 ATOH8Q96SQ7 321 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 LRRC40Q9H9A6 602 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 ZNF581Q9P0T4 197 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PTBP2Q9UKA9 531 aaKnown RBP4.36□□□□□ -1.71
CDKN3-203ENST00000395577 RPH3ALQ9UNE2 315 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 OARD1Q9Y530 152 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 MYH8P13535 1937 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 PKD1L2Q7Z442 2459 aa4.36□□□□□ -1.71
CDKN3-203ENST00000395577 FRYQ5TBA9 3013 aa4.35□□□□□ -1.71
CDKN3-203ENST00000395577 A0A1W2PNV4 684 aa4.35□□□□□ -1.71
CDKN3-203ENST00000395577 LOC730098B7Z3J9 87 aa4.35□□□□□ -1.71
CDKN3-203ENST00000395577 BTN3A3O00478 584 aa4.35□□□□□ -1.71
CDKN3-203ENST00000395577 SLC17A2O00624 439 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms