RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 A0A1B0GVT2 93 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 URADA6NGE7 173 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 C17orf51A8MQB3 221 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 KIR2DS3K7RE56 304 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 ORC5O43913 435 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 GMFGO60234 142 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 SC5DO75845 299 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 AHCYP23526 432 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 TDGQ13569 410 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 KIR2DS5Q14953 304 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 NTRK2Q16620 822 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 CEP78Q5JTW2 689 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 PXKQ7Z7A4 578 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 LRRC28Q86X40 367 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 CDK20Q8IZL9 346 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 AVL9Q8NBF6 648 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 GRPEL2Q8TAA5 225 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 PCNPQ8WW12 178 aaKnown RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 THAP4Q8WY91 577 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 PHF21AQ96BD5 680 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 TSSK2Q96PF2 358 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM27Q9HBJ8 222 aa12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 KRCC1Q9NPI7 259 aaPredicted RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 TMA7Q9Y2S6 64 aaKnown RBP12.38□□□□□ -0.43
GTF2F1-201ENST00000394456 HEATR5AQ86XA9 2040 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR10H2O60403 315 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 MT-ND4P03905 459 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 NPR2P20594 1047 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 DRD5P21918 477 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 GIFP27352 417 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CLDN12P56749 244 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 RPS11P62280 158 aaKnown RBP eCLIP12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 UBXN2BQ14CS0 331 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 PARGQ86W56 976 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 SIAH3Q8IW03 269 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 SERPINA12Q8IW75 414 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 RNF113BQ8IZP6 322 aaKnown RBP12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR4C3Q8NH37 302 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CTHRC1Q96CG8 243 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CCDC3Q9BQI4 270 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 SLA2Q9H6Q3 261 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 KLHL21Q9UJP4 597 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 ENTPD2Q9Y5L3 495 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CACNG2Q9Y698 323 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 IGHV1OR15-9A0A0B4J2B8 117 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR5K3A6NET4 321 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CHP2O43745 196 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR2B3O76000 313 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 C1QBP02746 253 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF3P17036 446 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 BDH1Q02338 343 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OOSP2Q86WS3 158 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 RCBTB1Q8NDN9 531 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 TOR1AIP2Q8NFQ8 470 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR11H4Q8NGC9 324 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 OR51Q1Q8NH59 317 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 BRD7Q9NPI1 651 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 SLCO1C1Q9NYB5 712 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 GNG8Q9UK08 70 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 ASXL3Q9C0F0 2248 aa12.37□□□□□ -0.43
GTF2F1-201ENST00000394456 CABIN1Q9Y6J0 2220 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ACOD1A6NK06 481 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 WNT1P04628 370 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 GAAP10253 952 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 HK1P19367 917 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 RAB3BP20337 219 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 F8A1P23610 371 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 TALDO1P37837 337 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 PPM1FP49593 454 aaPredicted RBP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 GDI2P50395 445 aaKnown RBP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ERVK-25P63136 954 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 RNF44Q7L0R7 432 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ZNF687Q8N1G0 1237 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 AKAP1Q92667 903 aaKnown RBP eCLIP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 YIPF5Q969M3 257 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 GFI1Q99684 422 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 FOLH1BQ9HBA9 442 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 LYRM4Q9HD34 91 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 GPR27Q9NS67 375 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ANKRD10Q9NXR5 420 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ADAM30Q9UKF2 790 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 SATB2Q9UPW6 733 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A087WV62 115 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 A0A1B0GTH9 108 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 OR5K4A6NMS3 321 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 OIP5O43482 229 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 NKX2-2O95096 273 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 MAOAP21397 527 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ERP29P30040 261 aaKnown RBP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 RPS27P42677 84 aaKnown RBP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 HES5Q5TA89 166 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 ARMC6Q6NXE6 501 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 SAMD14Q8IZD0 417 aaPredicted RBP12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 OR6K6Q8NGW6 343 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 STACQ99469 402 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 SLC2A4RGQ9NR83 387 aa12.36□□□□□ -0.43
GTF2F1-201ENST00000394456 CHRNA9Q9UGM1 479 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms