RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TMEM91Q6ZNR0 172 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 KMT5CQ86Y97 462 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 MARCH9Q86YJ5 346 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 OMA1Q96E52 524 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 CTRCQ99895 268 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 HOXD1Q9GZZ0 328 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 ASB6Q9NWX5 421 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 BABAM2Q9NXR7 383 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 ZMIZ1Q9ULJ6 1067 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 GRIP1Q9Y3R0 1128 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 PCDHGB6Q9Y5F9 930 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 A0A075B6Q4 140 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 OR6C68A6NDL8 312 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 SLC22A31A6NKX4 558 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 GABRPO00591 440 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 SCO2O43819 266 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 AKAP8O43823 692 aaKnown RBP13.75□□□□□ -0.21
GPC3-202ENST00000394299 TSPAN2O60636 221 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 F13BP05160 661 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 ADH7P40394 386 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 GALEQ14376 348 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 CD200R1LQ6Q8B3 271 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 MAML2Q8IZL2 1156 aaPredicted RBP13.75□□□□□ -0.21
GPC3-202ENST00000394299 TSSK2Q96PF2 358 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 PPIL3Q9H2H8 161 aaKnown RBP13.75□□□□□ -0.21
GPC3-202ENST00000394299 ABCB9Q9NP78 766 aa13.75□□□□□ -0.21
GPC3-202ENST00000394299 FREM2Q5SZK8 3169 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 NUDT14O95848 222 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 TFP02787 698 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 TDGF1P13385 188 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ZNF45Q02386 682 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ZSWIM7Q19AV6 140 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 SPANXN2Q5MJ10 180 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ARHGAP11AQ6P4F7 1023 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 OR14A16Q8NHC5 309 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 HTRA1Q92743 480 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ATOH1Q92858 354 aaPredicted RBP13.74□□□□□ -0.21
GPC3-202ENST00000394299 C4orf36Q96KX1 117 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 Q96M85 177 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 COPS7AQ9UBW8 275 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ZNF337Q9Y3M9 751 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 BOLA2-SMG1P6H3BVE0 249 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 NDUFB5O43674 189 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 SCRG1O75711 98 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 IL1AP01583 271 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 SPNP16150 400 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 AZGP1P25311 298 aaKnown RBP13.74□□□□□ -0.21
GPC3-202ENST00000394299 RPS5P46782 204 aaKnown RBP13.74□□□□□ -0.21
GPC3-202ENST00000394299 BCAP31P51572 246 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 CD300CQ08708 224 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ZNF74Q16587 644 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 FAM27D1Q5T7N8 215 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 ARL9Q6T311 187 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 TMPRSS11AQ6ZMR5 421 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 SLC29A4Q7RTT9 530 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 POC5Q8NA72 575 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 C17orf47Q8NEP4 570 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 EDAQ92838 391 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 CCDC74BQ96LY2 380 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 SLC30A2Q9BRI3 323 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 DUSP23Q9BVJ7 150 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 JAM3Q9BX67 310 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 MIXL1Q9H2W2 232 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 OCIAD1Q9NX40 245 aa13.74□□□□□ -0.21
GPC3-202ENST00000394299 CRNNQ9UBG3 495 aaPredicted RBP13.74□□□□□ -0.21
GPC3-202ENST00000394299 TRDV1A0A1B0GX56 115 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 IDSB3KWA1 339 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 LOC110117498-PIK3R3F6TDL0 507 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 CASKO14936 926 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 CBFA2T3O75081 653 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 SNX4O95219 450 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 IMPDH2P12268 514 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 ACVR1BP36896 505 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 CDKN2AP42771 156 aaKnown RBP13.73□□□□□ -0.21
GPC3-202ENST00000394299 PSPHP78330 225 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 RUNX1T1Q06455 604 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 SLC3A1Q07837 685 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 LPAL2Q16609 132 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 NKAIN1Q4KMZ8 207 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 TUBA3EQ6PEY2 450 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 SLITRK4Q8IW52 837 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 PLPP5Q8NEB5 264 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 OR5W2Q8NH69 310 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 NECAB3Q96P71 396 aaPredicted RBP13.73□□□□□ -0.21
GPC3-202ENST00000394299 SMOC1Q9H4F8 434 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 NRIP3Q9NQ35 241 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 NANSQ9NR45 359 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 BAIAP2Q9UQB8 552 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 ADAMTS20P59510 1910 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 TEX13CA0A0J9YWL9 993 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 RNF13O43567 381 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 IFNGP01579 166 aa13.73□□□□□ -0.21
GPC3-202ENST00000394299 HNRNPCP07910 306 aaKnown RBP eCLIP13.73□□□□□ -0.215e-7■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms