RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 LIX1LQ8IVB5 337 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 SLC2A12Q8TD20 617 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 HOXB13Q92826 284 aaPredicted RBP8.44□□□□□ -1.06
CDH11-202ENST00000394156 SMIM3Q9BZL3 60 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 INIPQ9NRY2 104 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 NDUFAF4Q9P032 175 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 HMX3A6NHT5 357 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 H0YIV9 168 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 PEX11BO96011 259 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 CDK1P06493 297 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 HOXB6P17509 224 aaKnown RBP8.44□□□□□ -1.06
CDH11-202ENST00000394156 PKLRP30613 574 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 SSTR2P30874 369 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 PLAG1Q6DJT9 500 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 PAMR1Q6UXH9 720 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 CYHR1Q6ZMK1 362 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 PRSS48Q7RTY5 328 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 ELP4Q96EB1 424 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 ZNF471Q9BX82 626 aaPredicted RBP8.44□□□□□ -1.06
CDH11-202ENST00000394156 ZNF696Q9H7X3 374 aa8.44□□□□□ -1.06
CDH11-202ENST00000394156 P2RY10O00398 339 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 HOXC11O43248 304 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 CEACAM5P06731 702 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ITIH1P19827 911 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 CSNK1A1P48729 337 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 MFSD13AQ14CX5 517 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 TMEM201Q5SNT2 666 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 OR2T4Q8NH00 348 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 SLCO4A1Q96BD0 722 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 CCDC74BQ96LY2 380 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ANKRD60Q9BZ19 345 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 UBQLN4Q9NRR5 601 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 CCDC59Q9P031 241 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 TRIM23P36406 574 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 TUBA4AP68366 448 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 GLO1Q04760 184 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 SPEM2Q0P670 501 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 NTRK2Q16620 822 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 C14orf28Q4W4Y0 310 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 LCN10Q6JVE6 187 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 METTL25Q8N6Q8 603 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PLPP7Q8NBV4 271 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 DENND6BQ8NEG7 585 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ABHD11Q8NFV4 315 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 AKAP1Q92667 903 aaKnown RBP eCLIP8.43□□□□□ -1.06
CDH11-202ENST00000394156 PDLIM5Q96HC4 596 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZNF285Q96NJ3 590 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 LRRC3BQ96PB8 259 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ABCG5Q9H222 651 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PAQR5Q9NXK6 330 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 IL37Q9NZH6 218 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 OR51B4Q9Y5P0 310 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 POM121CA8CG34 1229 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 TUBG1P23258 451 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PTAFRP25105 342 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 TRIM46Q7Z4K8 759 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 DNAJC5GQ8N7S2 189 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 OR52I1Q8NGK6 324 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 OLIG1Q8TAK6 271 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 TESCQ96BS2 214 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 INTS14Q96SY0 518 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PDCD1LG2Q9BQ51 273 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PLEKHJ1Q9NW61 149 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 FZR1Q9UM11 496 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 LSM5Q9Y4Y9 91 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 OR14I1A6ND48 311 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 FOXE1O00358 373 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 PLRG1O43660 514 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZNF12P17014 697 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 DCKP27707 260 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 APLNRP35414 380 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PITPNBP48739 271 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 AGFG1P52594 562 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 TMBIM6P55061 237 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ILKQ13418 452 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 CRMP1Q14194 572 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 SLC22A10Q63ZE4 541 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 MEPCEQ7L2J0 689 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZNF582Q96NG8 517 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 CTSFQ9UBX1 484 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 A0A1W2PR80 420 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZNF705EA8MWA4 302 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 INMT-MINDY4F8WBC2 141 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 GABRPO00591 440 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 P2RX6O15547 441 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZFAND5O76080 213 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ART1P52961 327 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 MALLQ13021 153 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 CTU2Q2VPK5 515 aaKnown RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 ZNF322Q6U7Q0 402 aaPredicted RBP8.43□□□□□ -1.06
CDH11-202ENST00000394156 FCRLAQ7L513 359 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 NINJ1Q92982 152 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 NEDD4LQ96PU5 975 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 LRRC61Q9BV99 259 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 SEMA4CQ9C0C4 833 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 SYT4Q9H2B2 425 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ACOT13Q9NPJ3 140 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 PLA2G3Q9NZ20 509 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 ABCD2Q9UBJ2 740 aa8.43□□□□□ -1.06
CDH11-202ENST00000394156 A0A1B0GWA3 101 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms