RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 SERPINA7P05543 415 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 PRR23D2P0DMB1 279 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 PEPDP12955 493 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 ZNF3P17036 446 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 PRKCAP17252 672 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 CSRP1P21291 193 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 ATP6V1E1P36543 226 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 AQP2P41181 271 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 SLC15A1P46059 708 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 MTNR1AP48039 350 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 LIMK1P53667 647 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 GP2P55259 537 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 PRPS1P60891 318 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 RPS7P62081 194 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 ERVK-25P63136 954 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 LTBQ06643 244 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 INPP5JQ15735 1006 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 TMEM44Q2T9K0 475 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 C1QL3Q5VWW1 255 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 B3GNTL1Q67FW5 361 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 NANOGNBQ7Z5D8 188 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 DND1Q8IYX4 353 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 SLC43A2Q8N370 569 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 FAM98AQ8NCA5 519 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 MOSPD2Q8NHP6 518 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 RNF138Q8WVD3 245 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 FGF11Q92914 225 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 NKD1Q969G9 470 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 ISOC1Q96CN7 298 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 THOC3Q96J01 351 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 TAPBPLQ9BX59 468 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 B3GNT4Q9C0J1 378 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 GPN2Q9H9Y4 310 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 HINT3Q9NQE9 182 aaKnown RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 CMC2Q9NRP2 79 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 ANKRD10Q9NXR5 420 aa7.84□□□□□ -1.15
TDP1-203ENST00000393454 CHCHD2Q9Y6H1 151 aaPredicted RBP7.84□□□□□ -1.15
TDP1-203ENST00000393454 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 A8MVM7 634 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 B4DXG7 233 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SHISA8B8ZZ34 492 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 G3V3Y1 287 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 DLL1O00548 723 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 TERTO14746 1132 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 TRMUO75648 421 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 SERPINI2O75830 405 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 AHSA1O95433 338 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 IGF2P01344 180 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 HSMCR30P0CW71 290 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ACVR2AP27037 513 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SLC16A1P53985 500 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 FOXF1Q12946 379 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CHAF1BQ13112 559 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SNTA1Q13424 505 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 MED22Q15528 200 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 TBCEQ15813 527 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 KLHL12Q53G59 568 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 AADACL4Q5VUY2 407 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 C1orf140Q5VVS0 124 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 NXNL2Q5VZ03 156 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 SLC22A10Q63ZE4 541 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ARHGAP11AQ6P4F7 1023 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 DPY19L2P2Q6ZN68 376 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CYB561A3Q8NBI2 242 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR52E2Q8NGJ4 325 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR52I1Q8NGK6 324 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR4K13Q8NH42 304 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 C9orf43Q8TAL5 461 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 FCGR1BQ92637 280 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 KIAA1143Q96AT1 154 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 LGALS12Q96DT0 336 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CRELD1Q96HD1 420 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 JSRP1Q96MG2 331 aaPredicted RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR11A1Q9GZK7 315 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 NDEL1Q9GZM8 345 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 NAA50Q9GZZ1 169 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 OR51V1Q9H2C8 321 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 PTGES2Q9H7Z7 377 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 KLHL1Q9NR64 748 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ERGIC3Q9Y282 383 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ADAM18Q9Y3Q7 739 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 HRH3Q9Y5N1 445 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 IGLV3-32A0A0A0MS00 114 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 IRGMA1A4Y4 181 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 RAB36O95755 333 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 PTHP01270 115 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 BGLAPP02818 100 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ADRA2AP08913 450 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ASAH2BP0C7U1 165 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 ADORA3P0DMS8 318 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CCL3P10147 92 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 TFPIP10646 304 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 CEACAM1P13688 526 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 HIST1H1CP16403 213 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 PAICSP22234 425 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 CD82P27701 267 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 DCKP27707 260 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 GSTT1P30711 240 aa7.83□□□□□ -1.16
TDP1-203ENST00000393454 APOBEC1P41238 236 aaKnown RBP7.83□□□□□ -1.16
TDP1-203ENST00000393454 RAB40BQ12829 278 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms