RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 ELAVL1Q15717 326 aaKnown RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 OR7E24Q6IFN5 339 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM53Q6P2H8 277 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 NKAIN4Q8IVV8 208 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 UBALD2Q8IYN6 164 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 RPL3LQ92901 407 aaKnown RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 ELF4Q99607 663 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 ALG12Q9BV10 488 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 LRRC61Q9BV99 259 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 DIMT1Q9UNQ2 313 aaKnown RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 NTNG1Q9Y2I2 539 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SNX11Q9Y5W9 270 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SCG5P05408 212 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 HTR1FP30939 366 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 PSPHP78330 225 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 PCGF3Q3KNV8 242 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 RPL22L1Q6P5R6 122 aaKnown RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 MOKQ9UQ07 419 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 CAMK2AQ9UQM7 478 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 A0A0A6YYD5 115 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SPTY2D1-AS1A0A0U1RR47 76 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 GABRA5P31644 462 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 MAN2A2P49641 1150 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 CLDN17P56750 224 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 ACTBP60709 375 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 ACTG1P63261 375 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 BTG2P78543 158 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 PUDPQ08623 228 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 ATXN7L3Q14CW9 347 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 LIX1LQ8IVB5 337 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 LRRC18Q8N456 261 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SPEM1Q8N4L4 309 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 BOLLQ8N9W6 283 aaKnown RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 OR6Q1Q8NGQ2 317 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 FAM210AQ96ND0 272 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 TWSG1Q9GZX9 223 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 OR10A2Q9H208 303 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 TAS2R8Q9NYW2 309 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 RASD1Q9Y272 281 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 MELKQ14680 651 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 YOD1Q5VVQ6 348 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 NT5CQ8TCD5 201 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SLC25A44Q96H78 314 aaPredicted RBP15.33■□□□□ 0.04
SCN3B-202ENST00000392770 CACNG6Q9BXT2 260 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 SLC6A14Q9UN76 642 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 V9GY05 133 aa15.33■□□□□ 0.04
SCN3B-202ENST00000392770 GXYLT1Q4G148 440 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 TSSK4Q6SA08 328 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 RIMKLAQ8IXN7 391 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 LRRC56Q8IYG6 542 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-202ENST00000392770 MGAT4AQ9UM21 535 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 AMY2AP04746 511 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 PRR35P0CG20 571 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM244Q5VVB8 128 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 SLC22A10Q63ZE4 541 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ABHD12BQ7Z5M8 362 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-202ENST00000392770 GIMAP5Q96F15 307 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 CHST8Q9H2A9 424 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 VSX1Q9NZR4 365 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-202ENST00000392770 EMC3Q9P0I2 261 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM269A0A1B0GVZ9 245 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 CDHR4A6H8M9 788 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 KCNK2O95069 426 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 IL1AP01583 271 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 CD46P15529 392 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 SERPINA12Q8IW75 414 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 OR13F1Q8NGS4 319 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 UBE2FQ969M7 185 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 UTP23Q9BRU9 249 aaKnown RBP15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ENKD1Q9H0I2 346 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 TCEAL2Q9H3H9 227 aaPredicted RBP15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF385DQ9H6B1 395 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 TMEM165Q9HC07 324 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF281Q9Y2X9 895 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 SFTPBP07988 381 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ARSBP15848 533 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 AKR1C4P17516 323 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 COL9A1P20849 921 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 THBS2P35442 1172 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 RUNX2Q13950 521 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF566Q969W8 418 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 SLC6A15Q9H2J7 730 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 ZNF225Q9UK10 706 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 POU2F3Q9UKI9 436 aa15.32■□□□□ 0.04
SCN3B-202ENST00000392770 hCG_1807616A0A1W2PRN6 198 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 POU2F2P09086 479 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 OR8G3PP0DMU2 310 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CAV3P56539 151 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CRMP1Q14194 572 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 NDUFAF7Q7L592 441 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 MRPL21Q7Z2W9 205 aaKnown RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 RADILQ96JH8 1075 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CACNG2Q9Y698 323 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 F10P00742 488 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 CHRM4P08173 479 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 GNRHRP30968 328 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 GFERP55789 205 aa15.31■□□□□ 0.04
SCN3B-202ENST00000392770 RNASE10Q5GAN6 216 aaKnown RBP15.31■□□□□ 0.04
SCN3B-202ENST00000392770 PTOV1Q86YD1 416 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms