RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 FAM86C2PA6NEL3 165 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 HMX3A6NHT5 357 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 SERPINI2O75830 405 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 TNFSF8P32971 234 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 RORCP51449 518 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 HNRNPA0Q13151 305 aaKnown RBP19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 ZNF550Q7Z398 422 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 LAX1Q8IWV1 398 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 SDR9C7Q8NEX9 313 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 OR4K13Q8NH42 304 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 SLC2A12Q8TD20 617 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 SNAPC3Q92966 411 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 CLDN23Q96B33 292 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 CEP19Q96LK0 163 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 ERMAPQ96PL5 475 aaPredicted RBP19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 TEAD3Q99594 435 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 NDC1Q9BTX1 674 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 FN3KQ9H479 309 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 CMC2Q9NRP2 79 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 TMEM5Q9Y2B1 443 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 IRGMA1A4Y4 181 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 CPED1A4D0V7 1026 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 HCN1O60741 890 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 TPBGQ13641 420 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 ZMAT1Q5H9K5 638 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 KLHL36Q8N4N3 616 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 KISS1RQ969F8 398 aaPredicted RBP19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 SMURF1Q9HCE7 757 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 PRODH2Q9UF12 536 aa19.47■□□□□ 0.71
SPTBN4-203ENST00000392023 C2orf92A0A1B0GVN3 265 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 BLACEA4D250 179 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 CD8B2A6NJW9 211 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 PDGFBP01127 241 aaPredicted RBP19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 CD8BP10966 210 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 KLHL26Q53HC5 615 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 LINC00114Q6XXX2 140 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 OR52E2Q8NGJ4 325 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 ZNF304Q9HCX3 659 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 FGF21Q9NSA1 209 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 MKL2Q9ULH7 1088 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 SIRT4Q9Y6E7 314 aaPredicted RBP19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 IGHV3-20A0A0C4DH32 117 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 SLC35F4A4IF30 521 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 MCIDASD6RGH6 385 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 MAGEB4O15481 346 aaPredicted RBP19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 ZNF780AO75290 641 aaPredicted RBP19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 IGHA1P01876 353 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 IL7P13232 177 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 PRKACAP17612 351 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 SPANXN2Q5MJ10 180 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 ZNF322Q6U7Q0 402 aaPredicted RBP19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 GDPGP1Q6ZNW5 385 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 RTL4Q6ZR62 310 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 LANCL3Q6ZV70 420 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 CCDC74AQ96AQ1 378 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 TIMP4Q99727 224 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 NUDT9Q9BW91 350 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 CTSFQ9UBX1 484 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 PCDHGB6Q9Y5F9 930 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 IER3IP1Q9Y5U9 82 aa19.46■□□□□ 0.71
SPTBN4-203ENST00000392023 C4orf47A7E2U8 309 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 J3QRE1 110 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 SLC30A4O14863 429 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 NCR1O76036 304 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 HIST1H1CP16403 213 aaKnown RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 ARHGAP40Q5TG30 622 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 D2HGDHQ8N465 521 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 DTX3Q8N9I9 347 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 LILRB1Q8NHL6 650 aaPredicted RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 ZNF721Q8TF20 911 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 C3orf49Q96BT1 292 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 ALG8Q9BVK2 526 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 DUSP15Q9H1R2 295 aaPredicted RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 RIIAD1A6NNX1 92 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 NOS1APO75052 506 aaPredicted RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 SOX30O94993 753 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 DDAH2O95865 285 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 FBLP22087 321 aaKnown RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 POMZP3Q6PJE2 187 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 ACBD7Q8N6N7 88 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 PMEPA1Q969W9 287 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 KCTD7Q96MP8 289 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 ELF4Q99607 663 aaPredicted RBP19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 SYNDIG1Q9H7V2 258 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 KLHL1Q9NR64 748 aa19.45■□□□□ 0.7
SPTBN4-203ENST00000392023 DAPL1A0PJW8 107 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 AZGP1P25311 298 aaKnown RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 RPL4P36578 427 aaKnown RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 VASNQ6EMK4 673 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 CCDC190Q86UF4 302 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 GID4Q8IVV7 300 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 RFLNBQ8N5W9 214 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 FAM98AQ8NCA5 519 aaKnown RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 ZNF578Q96N58 590 aaPredicted RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 SDHCQ99643 169 aaPredicted RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 CCDC86Q9H6F5 360 aaKnown RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 MKKSQ9NPJ1 570 aaPredicted RBP19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 SERTAD3Q9UJW9 196 aa19.44■□□□□ 0.7
SPTBN4-203ENST00000392023 A0A087WUJ7 227 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms