RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 CYTIPO60759 359 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 GPIP06744 558 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 CD8BP10966 210 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 IMPDH2P12268 514 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 HSD17B1P14061 328 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 GGT1P19440 569 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 COL8A1P27658 744 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 AGTR1P30556 359 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 PEX19P40855 299 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 RASGEF1BQ0VAM2 473 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 NPTX1Q15818 432 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 ENTPD8Q5MY95 495 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 TMEM201Q5SNT2 666 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 C1orf140Q5VVS0 124 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 BTLAQ7Z6A9 289 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 LUZP2Q86TE4 346 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR4D11Q8NGI4 311 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 PIGXQ8TBF5 258 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 ADAMTS16Q8TE57 1224 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 SLC38A4Q969I6 547 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 STARD4Q96DR4 205 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 CDRT15Q96T59 188 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 NAA11Q9BSU3 229 aaPredicted RBP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 POLR2J2Q9GZM3 115 aaKnown RBP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 POLR2J3Q9H1A7 115 aaKnown RBP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 NPDC1Q9NQX5 325 aaPredicted RBP13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 PROCRQ9UNN8 238 aa13.42□□□□□ -0.26
IGHV3-53-201ENST00000390627 A0A087WUJ7 227 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 TRAPPC13A5PLN9 417 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 LIPT2A6NK58 231 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 A8MXE2 369 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 CHP2O43745 196 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 NPIPB7O75200 414 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 ZNF682O95780 498 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 SERPINA1P01009 418 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 COX6B1P14854 86 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 FPR1P21462 350 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 GTF2E2P29084 291 aaKnown RBP13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 UQCRC1P31930 480 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 CDH12P55289 794 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 CEACAM7Q14002 265 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 PDK3Q15120 406 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR7A5Q15622 319 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 GLYATQ6IB77 296 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 PAQR6Q6TCH4 344 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 CBLL1Q75N03 491 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 RBM45Q8IUH3 476 aaKnown RBP13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 RNF148Q8N7C7 305 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 RBM15BQ8NDT2 890 aaKnown RBP13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 EPYCQ99645 322 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 SPOCK3Q9BQ16 436 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 PSD2Q9BQI7 771 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 RBM24Q9BX46 236 aaKnown RBP13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 ENKD1Q9H0I2 346 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 BCO1Q9HAY6 547 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 EMC3Q9P0I2 261 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 EGFL7Q9UHF1 273 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 MAGEL2Q9UJ55 1249 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 RPS6KA6Q9UK32 745 aa13.41□□□□□ -0.26
IGHV3-53-201ENST00000390627 HNRNPRO43390 633 aaKnown RBP13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 OR2T1O43869 369 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 YES1P07947 543 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 NCK1P16333 377 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 TCN1P20061 433 aaPredicted RBP13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 TNFRSF1BP20333 461 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 IFNA8P32881 189 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 CPOXP36551 454 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 TAS2R41P59536 307 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 H3F3AP84243 136 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 EGR4Q05215 589 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 IFI44LQ53G44 452 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 FAM69AQ5T7M9 428 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 DEF8Q6ZN54 512 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 STK32CQ86UX6 486 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 KIF18BQ86Y91 864 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 TUSC5Q8IXB3 177 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 ARHGAP24Q8N264 748 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 ACBD4Q8NC06 268 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 MFSD8Q8NHS3 518 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 MPP4Q96JB8 637 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 TMEM43Q9BTV4 400 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 SLC24A3Q9HC58 644 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 CD300AQ9UGN4 299 aa13.4□□□□□ -0.26
IGHV3-53-201ENST00000390627 HCFC1P51610 2035 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 IGKV1D-42A0A075B6H8 117 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 TRAV36DV7A0A075B6V5 113 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 IGKV3D-15A0A087WSY6 115 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 ZNF724A8MTY0 619 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 GPR171O14626 319 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 OR5F1O95221 314 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 CGAP01215 116 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 IFNW1P05000 195 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 T-ENOLP0DO92 83 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 IGFBP2P18065 325 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 KLK2P20151 261 aa13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 RPS5P46782 204 aaKnown RBP13.39□□□□□ -0.27
IGHV3-53-201ENST00000390627 OR1E2P47887 323 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms