RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 TCTE3Q8IZS6 198 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ENDOVQ8N8Q3 282 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 SIMC1Q8NDZ2 872 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SLC2A11Q9BYW1 496 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SELENOIQ9C0D9 397 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SAP130Q9H0E3 1048 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZNF696Q9H7X3 374 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 RANGRFQ9HD47 186 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 PGAP2Q9UHJ9 254 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 MAN2B1O00754 1011 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 PHF1O43189 567 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 PRAMEF4O60810 478 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 MRPL33O75394 65 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 CD63P08962 238 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 CD1CP29017 333 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 IDUAP35475 653 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 BIDP55957 195 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 NR0B2Q15466 257 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 RGNQ15493 299 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 MANEALQ5VSG8 457 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 C15orf52Q6ZUT6 534 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 SLC16A14Q7RTX9 510 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 OR52R1Q8NGF1 315 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZNF566Q969W8 418 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 APH1AQ96BI3 265 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ARSGQ96EG1 525 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZC3HAV1LQ96H79 300 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 AMDHD1Q96NU7 426 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SLC17A9Q9BYT1 436 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 TMPRSS5Q9H3S3 457 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SFXN1Q9H9B4 322 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ISYNA1Q9NPH2 558 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 CREBZFQ9NS37 354 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 MARCH4Q9P2E8 410 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 MADDQ8WXG6 1647 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 TMEM82A0PJX8 343 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZNF732B4DXR9 585 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 B3GALNT1O75752 331 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 PMP2P02689 132 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SOD2P04179 222 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 MMP2P08253 660 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZDHHC11BP0C7U3 371 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 CSN1S1P47710 185 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 UBE2G1P62253 170 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 SIRPAP78324 504 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ARHGAP1Q07960 439 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ACSM1Q08AH1 577 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 GPR17Q13304 367 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 LSAMPQ13449 338 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 EXOSC2Q13868 293 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 LYPD4Q6UWN0 246 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 CPEB2Q7Z5Q1 589 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 LSMEM2Q8N112 164 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 A0A0G2JLL6 359 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 UGDHO60701 494 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 NXPH2O95156 264 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 PTBP3O95758 552 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 HOXA10P31260 410 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 GMPRP36959 345 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 UBE2IP63279 158 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 ERV3-1Q14264 604 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ELAVL3Q14576 367 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 TATDN3Q17R31 274 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 TMEM184AQ6ZMB5 413 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 PRRT2Q7Z6L0 340 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 FRMD1Q8N878 549 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 OR5D18Q8NGL1 313 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 OR10K1Q8NGX5 313 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 C14orf79Q96F83 325 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 ZBED3Q96IU2 234 aaPredicted RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 AKR1E2Q96JD6 320 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 TM7SF3Q9NS93 570 aa5.49□□□□□ -1.53
RFX3-204ENST00000382004 LIN7CQ9NUP9 197 aaKnown RBP5.49□□□□□ -1.53
RFX3-204ENST00000382004 VWDEQ8N2E2 1590 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 BTBD17A6NE02 478 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 MROH6A6NGR9 719 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 SULT1C4O75897 302 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 SELENOWP63302 87 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 SNTB1Q13884 538 aaKnown RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 EXOSC7Q15024 291 aaKnown RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.48□□□□□ -1.53
RFX3-204ENST00000382004 PAGE3Q5JUK9 113 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 CATSPERDQ86XM0 798 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 KDF1Q8NAX2 398 aaPredicted RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 UBAC2Q8NBM4 344 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 ZNF596Q8TC21 504 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 ASB11Q8WXH4 323 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 IGSF8Q969P0 613 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 FBXW5Q969U6 566 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 SORBS1Q9BX66 1292 aaKnown RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 DMAC2Q9NW81 257 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 DUSP13Q9UII6 198 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 ZNF337Q9Y3M9 751 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 STYXL1Q9Y6J8 313 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 A0A0A6YYC8 382 aaPredicted RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 I3L1I5 382 aaPredicted RBP5.48□□□□□ -1.53
RFX3-204ENST00000382004 CA12O43570 354 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 SUSD5O60279 629 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 NTSR1P30989 418 aa5.48□□□□□ -1.53
RFX3-204ENST00000382004 GPR176Q14439 515 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms