RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 Q6ZNB5 142 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 MCATQ8IVS2 390 aaKnown RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 PELI1Q96FA3 418 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CRB3Q9BUF7 120 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 TMPRSS13Q9BYE2 586 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 NDRG3Q9UGV2 375 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SLC35A3Q9Y2D2 325 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 TRPM7Q96QT4 1865 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 HMSDA8MTL9 139 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 IDSB3KWA1 339 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SNAPC5O75971 98 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 OR2A4O95047 310 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CD53P19397 219 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 RBMS2Q15434 407 aaKnown RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 ELFN2Q5R3F8 820 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ASTLQ6HA08 431 aaPredicted RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 SEZ6L2Q6UXD5 910 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CACUL1Q86Y37 369 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 C12orf45Q8N5I9 185 aaPredicted RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 OR51S1Q8NGJ8 323 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 SEC22AQ96IW7 307 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 OR2A7Q96R45 310 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ZDHHC5Q9C0B5 715 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 LHX9Q9NQ69 397 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 CMC2Q9NRP2 79 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
HERC6-203ENST00000380265 MED31Q9Y3C7 131 aa11.23□□□□□ -0.61
HERC6-203ENST00000380265 TP53BP1Q12888 1972 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 KCNJ3P48549 501 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 IRF5Q13568 498 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 PABPC1L2AQ5JQF8 200 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 TMEM150AQ86TG1 271 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 DCUN1D3Q8IWE4 304 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 OR4N5Q8IXE1 308 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 LINC00469Q8N7U9 141 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 CPNE2Q96FN4 548 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 SLC25A32Q9H2D1 315 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ADAP2Q9NPF8 381 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 FBXL3Q9UKT7 428 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 URB1O60287 2271 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 BRCA2P51587 3418 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 KNL1Q8NG31 2342 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ANKRD20A5PA0PJZ0 165 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 TRAPPC13A5PLN9 417 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 OR2AT4A6NND4 320 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 CTDSPLO15194 276 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ANXA2P07355 339 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 TMIGD3P0DMS9 266 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 CAPZA2P47755 286 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 PSMD4P55036 377 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 TAS2R20P59543 309 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 RPS15P62841 145 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 FKBP1BP68106 108 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 DHODHQ02127 395 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 LIN54Q6MZP7 749 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ZC3H14Q6PJT7 736 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 ZNF793Q6ZN11 406 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 KLHDC8AQ8IYD2 350 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 SVBPQ8N300 66 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 OR4C16Q8NGL9 310 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 KISS1RQ969F8 398 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 SLC25A28Q96A46 364 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 SLC25A38Q96DW6 304 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 LCORQ96JN0 433 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 A0A1W2PR48 441 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 J3QRE1 110 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ABCD4O14678 606 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 F12P00748 615 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 CERS1P27544 350 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 SERTAD2Q14140 314 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 ZNF234Q14588 700 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 TCEA2Q15560 299 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 FAM199XQ6PEV8 388 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 OVCH1Q7RTY7 1134 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 GIMAP5Q96F15 307 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 HSPA12BQ96MM6 686 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 EXOSC3Q9NQT5 275 aaKnown RBP11.22□□□□□ -0.61
HERC6-203ENST00000380265 MBD2Q9UBB5 411 aa11.22□□□□□ -0.61
HERC6-203ENST00000380265 LEFTY2O00292 366 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 GREM1O60565 184 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 AIFM1O95831 613 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 IL5P05113 134 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 UBBP0CG47 229 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 UBCP0CG48 685 aaKnown RBP11.21□□□□□ -0.61
HERC6-203ENST00000380265 ATXN8OSP0DMR3 200 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 RPS27AP62979 156 aaKnown RBP11.21□□□□□ -0.61
HERC6-203ENST00000380265 UBA52P62987 128 aaKnown RBP11.21□□□□□ -0.61
HERC6-203ENST00000380265 GUCA2BQ16661 112 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 TMCO2Q7Z6W1 182 aaPredicted RBP11.21□□□□□ -0.61
HERC6-203ENST00000380265 NPAS4Q8IUM7 802 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 LNX2Q8N448 690 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 VN1R2Q8NFZ6 395 aa11.21□□□□□ -0.61
HERC6-203ENST00000380265 TNFRSF13CQ96RJ3 184 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms