RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 IDH3BO43837 385 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 RORAP35398 523 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 SLC37A1P57057 533 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 LGALS3BPQ08380 585 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 GGTLC2Q14390 218 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 ZMAT1Q5H9K5 638 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 FNDC7Q5VTL7 733 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 WBP2NLQ6ICG8 309 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 ZSCAN1Q8NBB4 408 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 OR5M3Q8NGP4 307 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 PTPMT1Q8WUK0 201 aaPredicted RBP19.72■□□□□ 0.75
TRIM54-202ENST00000380075 C3orf49Q96BT1 292 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 DCLRE1CQ96SD1 692 aaKnown RBP19.72■□□□□ 0.75
TRIM54-202ENST00000380075 TBX5Q99593 518 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 RNF215Q9Y6U7 377 aa19.72■□□□□ 0.75
TRIM54-202ENST00000380075 OR2W5A6NFC9 320 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 CD8B2A6NJW9 211 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 ARPC3O15145 178 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 NUDT21O43809 227 aaKnown RBP19.71■□□□□ 0.75
TRIM54-202ENST00000380075 TMCC2O75069 709 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 OR7A10O76100 309 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 CD8BP10966 210 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 HPGDP15428 266 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 ARL4DP49703 201 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 ASAH1Q13510 395 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 BAK1Q16611 211 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.71■□□□□ 0.75
TRIM54-202ENST00000380075 PLXDC1Q8IUK5 500 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 ATF6BQ99941 703 aa19.71■□□□□ 0.75
TRIM54-202ENST00000380075 FRG2CA6NGY1 282 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 PRPS1P60891 318 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 ZNF85Q03923 595 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 CBX3Q13185 183 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 FCRLBQ6BAA4 426 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 VASH1Q7L8A9 365 aaPredicted RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 AKAP14Q86UN6 197 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 TMEM151BQ8IW70 566 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 CYB561A3Q8NBI2 242 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 FAM98AQ8NCA5 519 aaKnown RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 OR52E2Q8NGJ4 325 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 GPX7Q96SL4 187 aaPredicted RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 TMEM43Q9BTV4 400 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 TIGARQ9NQ88 270 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 PCDHGB7Q9Y5F8 929 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 MAU2Q9Y6X3 613 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 IGKV3D-11A0A0A0MRZ8 115 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SCDO00767 359 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SIGLEC6O43699 453 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 DUX1O43812 170 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SLC19A2O60779 497 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 UBL4AP11441 157 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 GRK6P43250 576 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 DCAF7P61962 342 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 RPS4XP62701 263 aaKnown RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SLC35D3Q5M8T2 416 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 NKAIN2Q5VXU1 208 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 TTLL10Q6ZVT0 673 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SOSTQ9BQB4 213 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 PNO1Q9NRX1 252 aaKnown RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SEMA5BQ9P283 1151 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 COMMD3Q9UBI1 195 aa19.7■□□□□ 0.74
TRIM54-202ENST00000380075 SIRT4Q9Y6E7 314 aaPredicted RBP19.7■□□□□ 0.74
TRIM54-202ENST00000380075 IGHV1OR21-1A0A087WYE8 117 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 A0A1W2PQ09 198 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 FLRT2O43155 660 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 OR2T7P0C7T2 308 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 MYF5P13349 255 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 HIST1H1CP16403 213 aaKnown RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 AZGP1P25311 298 aaKnown RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 ACTA2P62736 377 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 ACTG2P63267 376 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 RIN1Q13671 783 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 NDUFAF6Q330K2 333 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 FAAH2Q6GMR7 532 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 TPRA1Q86W33 373 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 NAXDQ8IW45 347 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 SYS1Q8N2H4 156 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 IL17RDQ8NFM7 739 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 OR2T27Q8NH04 317 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 RHBDD1Q8TEB9 315 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 LIPHQ8WWY8 451 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 EFHD2Q96C19 240 aaPredicted RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 KCTD12Q96CX2 325 aaKnown RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 MRPL48Q96GC5 212 aaKnown RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 LCORQ96JN0 433 aaPredicted RBP19.69■□□□□ 0.74
TRIM54-202ENST00000380075 C4orf36Q96KX1 117 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 SLC22A4Q9H015 551 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 IER3IP1Q9Y5U9 82 aa19.69■□□□□ 0.74
TRIM54-202ENST00000380075 ELOA3DA6NLF2 546 aaPredicted RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 MRPL3P09001 348 aaKnown RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CLUP10909 449 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 GPLD1P80108 840 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CD300CQ08708 224 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ELAVL1Q15717 326 aaKnown RBP19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ELOA3BQ3SY89 546 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 PYDC2Q56P42 97 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 MS4A15Q8N5U1 240 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ELOA3Q8NG57 546 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 ART5Q96L15 291 aa19.68■□□□□ 0.74
TRIM54-202ENST00000380075 CNN2Q99439 309 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms