RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 HTR2AP28223 471 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 GZMMP51124 257 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 OR10A3P58181 314 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 TLE3Q04726 772 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 PGGHGQ32M88 737 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 WDR88Q6ZMY6 472 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 OR6C4Q8NGE1 309 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 OR4Q3Q8NH05 313 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 GAB3Q8WWW8 586 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 PPP1R14AQ96A00 147 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 MOGAT1Q96PD6 335 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 MND1Q9BWT6 205 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF222Q9UK12 451 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 MRTO4Q9UKD2 239 aaKnown RBP7.44□□□□□ -1.22
CKAP2-203ENST00000378037 NDRG4Q9ULP0 352 aaKnown RBP7.44□□□□□ -1.22
CKAP2-203ENST00000378037 AGAP5A6NIR3 686 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF264O43296 627 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 SRPX2O60687 465 aaPredicted RBP7.44□□□□□ -1.22
CKAP2-203ENST00000378037 WDPCPO95876 746 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 HPRP00739 348 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 IGKV1D-16P01601 117 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 SLC35E2P0CK97 266 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 HK1P19367 917 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 SLC6A6P31641 620 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 NR4A2P43354 598 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ADAM8P78325 824 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 FOXK2Q01167 660 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 FMODQ06828 376 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 C3P1Q6ZMU1 363 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF627Q7L945 461 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 TMPRSS12Q86WS5 348 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 OR14L1PQ8NHC6 308 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ASIC5Q9NY37 505 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 KCNE5Q9UJ90 142 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 CNOT11Q9UKZ1 510 aaKnown RBP7.44□□□□□ -1.22
CKAP2-203ENST00000378037 SPATA2Q9UM82 520 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 C19orf53Q9UNZ5 99 aaPredicted RBP7.44□□□□□ -1.22
CKAP2-203ENST00000378037 TSC22D4Q9Y3Q8 395 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 COL4A2P08572 1712 aa7.44□□□□□ -1.22
CKAP2-203ENST00000378037 ANXA2P2A6NMY6 339 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 FAM25EA8MYX2 175 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 H0YC42 278 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TGFBR3LH3BV60 316 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 EEF1E1O43324 174 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 HPGDSO60760 199 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ADAM11O75078 769 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 MPZL1O95297 269 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ZIC2O95409 532 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 HMGN1P05114 100 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ANXA2P07355 339 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ZGLP1P0C6A0 271 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 BMP4P12644 408 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 GSTM3P21266 225 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 APEX1P27695 318 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 DNASE1L1P49184 302 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 LGALS3BPQ08380 585 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 PDE7AQ13946 482 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 KLHL22Q53GT1 634 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 MDGA2Q7Z553 956 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TSEN54Q7Z6J9 526 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 RFLNBQ8N5W9 214 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 OR13F1Q8NGS4 319 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 FAM71F1Q96KD3 344 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 C10orf90Q96M02 699 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 DCBLD2Q96PD2 775 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 CMKLR1Q99788 373 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ARPC5LQ9BPX5 153 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 G6PC3Q9BUM1 346 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 MENTQ9BUN1 341 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TCF7L1Q9HCS4 588 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 NFKBIL1Q9UBC1 381 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 PSORS1C1Q9UIG5 152 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 GPC6Q9Y625 555 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 AKAP8O43823 692 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 GPX5O75715 221 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 CD3GP09693 182 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 GLB1P16278 677 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 RPS19P39019 145 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 NXPH1P58417 271 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ZNF846Q147U1 533 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 QPRTQ15274 297 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 NR0B2Q15466 257 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ATP1A1-AS1Q5TC04 95 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TMEM164Q5U3C3 297 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 SFRP4Q6FHJ7 346 aaPredicted RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ARSKQ6UWY0 536 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 MSANTD1Q6ZTZ1 278 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 KIF18BQ86Y91 864 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 OR10G3Q8NGC4 313 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 OR52I1Q8NGK6 324 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 ZPLD1Q8TCW7 415 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 PCNPQ8WW12 178 aaKnown RBP7.43□□□□□ -1.22
CKAP2-203ENST00000378037 APH1BQ8WW43 257 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 OR14A2Q96R54 314 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 A4GALTQ9NPC4 353 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TMEM138Q9NPI0 162 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 UBQLN4Q9NRR5 601 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 TAS2R10Q9NYW0 307 aa7.43□□□□□ -1.22
CKAP2-203ENST00000378037 EXTL2Q9UBQ6 330 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms