RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 MRPS2Q9Y399 296 aaKnown RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 MYO15AQ9UKN7 3530 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 SERPINI2O75830 405 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 HOXD4P09016 255 aaPredicted RBP16.55■□□□□ 0.24
GNE-201ENST00000377902 CPMP14384 443 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 RPS4Y1P22090 263 aaKnown RBP16.55■□□□□ 0.24
GNE-201ENST00000377902 GABRA3P34903 492 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 GBX2P52951 348 aaPredicted RBP16.55■□□□□ 0.24
GNE-201ENST00000377902 BTN1A1Q13410 526 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 LINC00303Q3SY05 128 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 FBXO42Q6P3S6 717 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 ADGRG3Q86Y34 549 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 SMARCD2Q92925 531 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 NOX3Q9HBY0 568 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 IER3IP1Q9Y5U9 82 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 RANBP2P49792 3224 aaKnown RBP16.55■□□□□ 0.24
GNE-201ENST00000377902 A0A1B0GWA3 101 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 SERPINA3P01011 423 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 FCER2P06734 321 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 CT62P0C5K7 136 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 EMDP50402 254 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 TUSC1Q2TAM9 212 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 SLITRK4Q8IW52 837 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 C7orf50Q9BRJ6 194 aaKnown RBP16.55■□□□□ 0.24
GNE-201ENST00000377902 LIN7BQ9HAP6 207 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 HAO2Q9NYQ3 351 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 KCNMB2Q9Y691 235 aa16.55■□□□□ 0.24
GNE-201ENST00000377902 PRR32B1ATL7 298 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 MCIDASD6RGH6 385 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 LGALS8O00214 317 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 CTSVO60911 334 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 SIX6O95475 246 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 TGM6O95932 706 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 AGR2O95994 175 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 TMIGD3P0DMS9 266 aaPredicted RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 NAT1P18440 290 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 MNX1P50219 401 aaPredicted RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 KIAA1024LP59773 190 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 NANOS3P60323 173 aaKnown RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 ACTC1P68032 377 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 ACTA1P68133 377 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 NHLRC3Q5JS37 347 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 SLC35F2Q8IXU6 374 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 ZBTB44Q8NCP5 570 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 OR5T3Q8NGG3 340 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 GAL3ST3Q96A11 431 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 KLHL15Q96M94 604 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 NMNAT3Q96T66 252 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 REG4Q9BYZ8 158 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 TSPAN10Q9H1Z9 355 aaPredicted RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 FKBP7Q9Y680 259 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 MUC22E2RYF6 1773 aaPredicted RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 A0A1B0GVT2 93 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 IFITM5A6NNB3 132 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 CTDSPLO15194 276 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 FGF17O60258 216 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 DPP4P27487 766 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 PLA2G7Q13093 441 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 SRSF5Q13243 272 aaKnown RBP16.54■□□□□ 0.24
GNE-201ENST00000377902 HTR4Q13639 388 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 FHL5Q5TD97 284 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 RPL13AP3Q6NVV1 102 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 ALKAL2Q6UX46 152 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 C3P1Q6ZMU1 363 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 OVCH1Q7RTY7 1134 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 PAQR7Q86WK9 346 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 GRAMD2AQ8IUY3 354 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 UXS1Q8NBZ7 420 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 OR6K6Q8NGW6 343 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 LCN9Q8WX39 176 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 OR1F2PQ96R84 312 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 SDHAF2Q9NX18 166 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
GNE-201ENST00000377902 PLSCR5A0PG75 271 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 AK4P27144 223 aaPredicted RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 TSFMP43897 325 aaKnown RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 PTH2RP49190 550 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 UBE2MP61081 183 aaKnown RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 FAM78AQ5JUQ0 283 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 TMEM81Q6P7N7 255 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 DNAAF1Q8NEP3 725 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 COQ8AQ8NI60 647 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 ZNF296Q8WUU4 475 aaPredicted RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 RAB7BQ96AH8 199 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 CNN2Q99439 309 aaKnown RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 RAB11FIP5Q9BXF6 653 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 C12orf10Q9HB07 376 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 TMEM27Q9HBJ8 222 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 NANSQ9NR45 359 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 TBC1D29Q9UFV1 150 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 DAPP1Q9UN19 280 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 C19orf53Q9UNZ5 99 aaPredicted RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 PTPRSQ13332 1948 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 NUPL2O15504 423 aaKnown RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 OR4N2Q8NGD1 307 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 SYNPRQ8TBG9 265 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 ZNF707Q96C28 371 aaPredicted RBP16.53■□□□□ 0.24
GNE-201ENST00000377902 RADILQ96JH8 1075 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 CAPNS2Q96L46 248 aa16.53■□□□□ 0.24
GNE-201ENST00000377902 ARPC5LQ9BPX5 153 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms