RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 STARP49675 285 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 CTBP2P56545 445 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 RAC1P63000 192 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 ST3GAL2Q16842 350 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 ZIK1Q3SY52 487 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 KDM4DQ6B0I6 523 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 RPUSD3Q6P087 351 aaKnown RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 DGCR6LQ9BY27 220 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 ZDHHC11Q9H8X9 412 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 ACKR4Q9NPB9 350 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 NANSQ9NR45 359 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 USE1Q9NZ43 259 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 TMEFF2Q9UIK5 374 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 NPIPA1Q9UND3 350 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 POFUT2Q9Y2G5 429 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 LIPGQ9Y5X9 500 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 TRGV5A0A0B4J1U4 118 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 A0A1W2PNR3 127 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 GJE1A6NN92 205 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 SEC14L5O43304 696 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 CRYABP02511 175 aaKnown RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 GSTM3P21266 225 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FPR3P25089 353 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FKBP2P26885 142 aaKnown RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 SHC1P29353 583 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 IDUAP35475 653 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 RAD23AP54725 363 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 AQP4P55087 323 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 GFRA1P56159 465 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 TSPAN31Q12999 210 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 MYBPHQ13203 477 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 INAQ16352 499 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 ZNF74Q16587 644 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 CMPK2Q5EBM0 449 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FAM69AQ5T7M9 428 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 KLHL17Q6TDP4 642 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FAM180AQ6UWF9 173 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 TMPRSS11FQ6ZWK6 438 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 LRRC17Q8N6Y2 441 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 MOGAT1Q96PD6 335 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 TAPBPLQ9BX59 468 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 SLC25A18Q9H1K4 315 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 RIBC2Q9H4K1 309 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 SMPD3Q9NY59 655 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-203ENST00000377344 FREM3P0C091 2139 aa11.67□□□□□ -0.54
CBWD3-203ENST00000377344 CACNA1GO43497 2377 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 TRAV27A0A087WT01 109 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 UNC119BA6NIH7 251 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 H3BN98 237 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 LINC01387J3KSC0 135 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 EIF1AYO14602 144 aaKnown RBP11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OR2T1O43869 369 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 NPIPB7O75200 414 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OR7A10O76100 309 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 SOX14O95416 240 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 SNAP29O95721 258 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 HIST1H2ABP04908 130 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 CDH2P19022 906 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-203ENST00000377344 CHMP24386 653 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 POU1F1P28069 291 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 GTF2E2P29084 291 aaKnown RBP11.66□□□□□ -0.54
CBWD3-203ENST00000377344 GSSP48637 474 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 NUP107P57740 925 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 C19orf57Q0VDD7 668 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 LY6DQ14210 128 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OR7A5Q15622 319 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 HIST3H2AQ7L7L0 130 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OAFQ86UD1 273 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OR13C2Q8NGS9 318 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 OR51A7Q8NH64 312 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 NEIL3Q8TAT5 605 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 DNAJC9Q8WXX5 260 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 HIST1H2ACQ93077 130 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 ABTB1Q969K4 478 aaPredicted RBP11.66□□□□□ -0.54
CBWD3-203ENST00000377344 PTDSS2Q9BVG9 487 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 POTEKPQ9BYX7 375 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 TNFRSF10DQ9UBN6 386 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 AP4B1Q9Y6B7 739 aa11.66□□□□□ -0.54
CBWD3-203ENST00000377344 HTR3EA5X5Y0 456 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 SULT2B1O00204 365 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 KLF4O43474 513 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 BGLAPP02818 100 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 SFTPCP11686 197 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 BMP7P18075 431 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 CLK1P49759 484 aaKnown RBP11.65□□□□□ -0.54
CBWD3-203ENST00000377344 CLDN20P56880 219 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 OR2B6P58173 313 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 SRYQ05066 204 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 LTBQ06643 244 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 COX10Q12887 443 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 TRILQ7L0X0 811 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 SLC46A3Q7Z3Q1 461 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 KLHL15Q96M94 604 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 TOR3AQ9H497 397 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 HDGFL3Q9Y3E1 203 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 PIEZO2Q9H5I5 2752 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 ACACBO00763 2458 aa11.65□□□□□ -0.54
CBWD3-203ENST00000377344 MPDZO75970 2070 aa11.65□□□□□ -0.55
CBWD3-203ENST00000377344 H0YC42 278 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms