RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 SLC17A1Q14916 467 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 GSTA3Q16772 222 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 LRRC74BQ6ZQY2 392 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 ZNF440Q8IYI8 595 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 ZNF525Q8N782 197 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 ZNF781Q8N8C0 355 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 POMGNT2Q8NAT1 580 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 C10orf105Q8TEF2 133 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 MTHFD2LQ9H903 347 aaPredicted RBP20.34■□□□□ 0.85
C9orf47-202ENST00000375850 SLC7A10Q9NS82 523 aa20.34■□□□□ 0.85
C9orf47-202ENST00000375850 A0A1W2PR80 420 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 NDUFS8O00217 210 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 LBPP18428 481 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 USF1P22415 310 aaPredicted RBP20.33■□□□□ 0.85
C9orf47-202ENST00000375850 TACR3P29371 465 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 S100A3P33764 101 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 RPL14P50914 215 aaKnown RBP20.33■□□□□ 0.85
C9orf47-202ENST00000375850 CNOT9Q92600 299 aaKnown RBP20.33■□□□□ 0.85
C9orf47-202ENST00000375850 TMEM109Q9BVC6 243 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 MOV10Q9HCE1 1003 aaKnown RBP20.33■□□□□ 0.85
C9orf47-202ENST00000375850 FKBP7Q9Y680 259 aa20.33■□□□□ 0.85
C9orf47-202ENST00000375850 PLCE1Q9P212 2302 aa20.33■□□□□ 0.84
C9orf47-202ENST00000375850 CFAP73A6NFT4 308 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 PHF1O43189 567 aaPredicted RBP20.32■□□□□ 0.84
C9orf47-202ENST00000375850 ITM2AO43736 263 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 F12P00748 615 aaPredicted RBP20.32■□□□□ 0.84
C9orf47-202ENST00000375850 GPIP06744 558 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 IMPDH2P12268 514 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 CCNA2P20248 432 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 GZMKP49863 264 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 PLAURQ03405 335 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 CHI3L2Q15782 390 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 FAM174BQ3ZCQ3 159 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 SPANXN4Q5MJ08 99 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 TSPO2Q5TGU0 170 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 WDR60Q8WVS4 1066 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 PPP1R36Q96LQ0 422 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 ZNF317Q96PQ6 595 aaPredicted RBP20.32■□□□□ 0.84
C9orf47-202ENST00000375850 SLC38A1Q9H2H9 487 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 SSU72Q9NP77 194 aaKnown RBP20.32■□□□□ 0.84
C9orf47-202ENST00000375850 MYOZ1Q9NP98 299 aaPredicted RBP20.32■□□□□ 0.84
C9orf47-202ENST00000375850 HAO1Q9UJM8 370 aa20.32■□□□□ 0.84
C9orf47-202ENST00000375850 TMEM72A0PK05 275 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 PRAMEF27A3QJZ7 478 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 OR6C65A6NJZ3 312 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 CLDN24A6NM45 220 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 DBIP07108 87 aaKnown RBP20.31■□□□□ 0.84
C9orf47-202ENST00000375850 CREB1P16220 341 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 IL7RP16871 459 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 RPS4Y1P22090 263 aaKnown RBP20.31■□□□□ 0.84
C9orf47-202ENST00000375850 FOXG1P55316 489 aaPredicted RBP20.31■□□□□ 0.84
C9orf47-202ENST00000375850 ZSWIM7Q19AV6 140 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 OGFOD2Q6N063 350 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 RNF130Q86XS8 419 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 PANX1Q96RD7 426 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 C1QTNF6Q9BXI9 259 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 SHARPINQ9H0F6 387 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 MANSC1Q9H8J5 431 aa20.31■□□□□ 0.84
C9orf47-202ENST00000375850 FBXO9Q9UK97 447 aaPredicted RBP20.31■□□□□ 0.84
C9orf47-202ENST00000375850 AP3D1O14617 1153 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 TM9SF1O15321 606 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 VAMP5O95183 116 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 PDLIM4P50479 330 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 LSM11P83369 360 aaKnown RBP eCLIP20.3■□□□□ 0.84
C9orf47-202ENST00000375850 EPS8Q12929 822 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 OTUD3Q5T2D3 398 aaPredicted RBP20.3■□□□□ 0.84
C9orf47-202ENST00000375850 AAED1Q7RTV5 226 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 PEX5LQ8IYB4 626 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 ANKFN1Q8N957 763 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 DNAJA3Q96EY1 480 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 PKNOX2Q96KN3 472 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 ADAM19Q9H013 955 aa20.3■□□□□ 0.84
C9orf47-202ENST00000375850 CCDC154A6NI56 674 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 CXCR1P25024 350 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 SLC1A6P48664 564 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 SYPL1Q16563 259 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 SWI5Q1ZZU3 235 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 MRPL2Q5T653 305 aaKnown RBP20.29■□□□□ 0.84
C9orf47-202ENST00000375850 C9orf135Q5VTT2 229 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 OR9K2Q8NGE7 335 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 KCNS3Q9BQ31 491 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 TAPBPLQ9BX59 468 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 MEAF6Q9HAF1 191 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 TMEM45AQ9NWC5 275 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 CALML5Q9NZT1 146 aa20.29■□□□□ 0.84
C9orf47-202ENST00000375850 WDR91A4D1P6 747 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 LIPT2A6NK58 231 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 AQP7P3A6NL99 342 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 ATP6V1G2-DDX39BF2Z307 99 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 LMX1BO60663 402 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 KRT75O95678 551 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 CHRM4P08173 479 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 IGHV4-31P0DP07 118 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 NR2F1P10589 423 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 SNRPD2P62316 118 aaKnown RBP20.28■□□□□ 0.84
C9orf47-202ENST00000375850 VSNL1P62760 191 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 SLC25A3Q00325 362 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 HMGN2P46Q86SG4 172 aa20.28■□□□□ 0.84
C9orf47-202ENST00000375850 AENQ8WTP8 325 aaKnown RBP20.28■□□□□ 0.84
C9orf47-202ENST00000375850 HTRA1Q92743 480 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms