RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 RAP1BP61224 184 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 HNRNPKP61978 463 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RAP1AP62834 184 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SPOCK1Q08629 439 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RAB30Q15771 203 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF385BQ569K4 471 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RAET1LQ5VY80 246 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 TCTN3Q6NUS6 607 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF529Q6P280 563 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PLXDC1Q8IUK5 500 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MCATQ8IVS2 390 aaKnown RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 UEVLDQ8IX04 471 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 OR1J4Q8NGS1 313 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 OR9A4Q8NGU2 314 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MYEOVQ96EZ4 313 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 BORCS8Q96FH0 119 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SCN7AQ01118 1682 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 KIR2DS5A0A0G2JLQ3 304 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 A0A0G2JNG1 304 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 KRBOX1C9JBD0 128 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 KIR2DS3K7RE56 304 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ADAM23O75077 832 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 LGI1O95970 557 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CDK2P24941 298 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PTBP1P26599 531 aaKnown RBP eCLIP10.73□□□□□ -0.693e-8■■■■□ 20.8
PTCH1-203ENST00000375274 VASPP50552 380 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RACK1P63244 317 aaKnown RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PLGLB1Q02325 96 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 KIR2DS5Q14953 304 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF750Q32MQ0 723 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 BEX5Q5H9J7 111 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 FAM69BQ5VUD6 431 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 FAM219BQ5XKK7 198 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 Q6ZSR6 202 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 BEND4Q6ZU67 534 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 IL17RDQ8NFM7 739 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 NPRL2Q8WTW4 380 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SMAP2Q8WU79 429 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CHST8Q9H2A9 424 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 FBXL2Q9UKC9 423 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SHROOM3Q8TF72 1996 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 LOXHD1Q8IVV2 1947 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 A0A1B0GWA3 101 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 B8ZZF3 427 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 ATP1B1P05026 303 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 BTG1P62324 171 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 EEF1A1P5Q5VTE0 462 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 SGPP2Q8IWX5 399 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TMEFF1Q8IYR6 380 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 SLC22A8Q8TCC7 542 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 NMNAT3Q96T66 252 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 VRK1Q99986 396 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 EMC7Q9NPA0 242 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 NOX4Q9NPH5 578 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 NDUFB11Q9NX14 153 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 DNMT3BQ9UBC3 853 aaKnown RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 VDAC3Q9Y277 283 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 LSM5Q9Y4Y9 91 aaKnown RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 BTAF1O14981 1849 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TMEM269A0A1B0GVZ9 245 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 ICMTO60725 284 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 PEX11BO96011 259 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 RAB3AP20336 220 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 RSU1Q15404 277 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 Q499Y3 187 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 NKAIN4Q8IVV8 208 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 OR5D14Q8NGL3 314 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 DDIT4LQ96D03 193 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 FOXN4Q96NZ1 517 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF225Q9UK10 706 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TMEM82A0PJX8 343 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TIMP1P01033 207 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 SERPINA5P05154 406 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 PPP3CBP16298 524 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TMEM164Q5U3C3 297 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 MFSD12Q6NUT3 480 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 OR51T1Q8NGJ9 327 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 FOXRED1Q96CU9 486 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 FN3KQ9H479 309 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 CPNE7Q9UBL6 633 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TMEFF2Q9UIK5 374 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 GMEB2Q9UKD1 530 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 SLC6A14Q9UN76 642 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 TTC3P53804 2025 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 ASPDHA6ND91 283 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 DAP3P51398 398 aaKnown RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 HTR4Q13639 388 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 CD276Q5ZPR3 534 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 XAF1Q6GPH4 301 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 DPY19L4Q7Z388 723 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 GPR155Q7Z3F1 870 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 STEAP2Q8NFT2 490 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 MR1Q95460 341 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 PFDN5Q99471 154 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 ST6GALNAC5Q9BVH7 336 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 CCDC86Q9H6F5 360 aaKnown RBP10.72□□□□□ -0.69
PTCH1-203ENST00000375274 HCFC2Q9Y5Z7 792 aa10.72□□□□□ -0.69
PTCH1-203ENST00000375274 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.71□□□□□ -0.69
PTCH1-203ENST00000375274 TEX51A0A1B0GUA7 166 aa10.71□□□□□ -0.69
PTCH1-203ENST00000375274 PEX12O00623 359 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms