RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 M6PRP20645 277 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 EDDM3AQ14507 147 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 B3GNT8Q7Z7M8 397 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 CLEC14AQ86T13 490 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 SORT1Q99523 831 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 MED18Q9BUE0 208 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 NAV1Q8NEY1 1877 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 HSD17B6O14756 317 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 GRPP07492 148 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 GJA4P35212 333 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 ZNF140P52738 457 aaPredicted RBP13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 LTBQ06643 244 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 CNN3Q15417 329 aaKnown RBP13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 SPRED3Q2MJR0 410 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 FCRLAQ7L513 359 aa13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 BSCL2Q96G97 398 aaPredicted RBP13.71□□□□□ -0.21
NOTCH4-201ENST00000375023 A0A1W2PPV4 95 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 AADACL3Q5VUY0 350 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 OR5AS1Q8N127 324 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 LILRA3Q8N6C8 439 aaPredicted RBP13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 ZNF337Q9Y3M9 751 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 ARID1BQ8NFD5 2236 aaPredicted RBP13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 PRRG2O14669 202 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 KIR2DS3Q14952 304 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 APOOLQ6UXV4 268 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 TRIB1Q96RU8 372 aa13.71□□□□□ -0.22
NOTCH4-201ENST00000375023 TMX2-CTNND1H3BSU7 103 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 ZFAND5O76080 213 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 IGHG1P01857 330 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 MGST1P10620 155 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 LYPD8Q6UX82 237 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 KDM8Q8N371 416 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SECTM1Q8WVN6 248 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 INTS6Q9UL03 887 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 AQP9O43315 295 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 HSD17B1P14061 328 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 HOXD9P28356 352 aaPredicted RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 EDDM3BP56851 147 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 PLA1AQ53H76 456 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 TMEM71Q6P5X7 295 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC22A25Q6T423 547 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 OR7G2Q8NG99 324 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC38A1Q9H2H9 487 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 V9GY05 133 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SURF4O15260 269 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 PRKNO60260 465 aaPredicted RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 NFYBP25208 207 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 GABARAPL2P60520 117 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 PLAG1Q6DJT9 500 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 ABHD11Q8NFV4 315 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SEC22AQ96IW7 307 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 TAS2R8Q9NYW2 309 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 CD300AQ9UGN4 299 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 TOR1AO14656 332 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC34A2O95436 690 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 GASTP01350 101 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC2A1P11166 492 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 HIST1H1TP22492 207 aaPredicted RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC22A10Q63ZE4 541 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 VRK3Q8IV63 474 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 STEAP2Q8NFT2 490 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC22A12Q96S37 553 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 BTBD2Q9BX70 525 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SIDT1Q9NXL6 827 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 C4orf47A7E2U8 309 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 CENPBD1B2RD01 187 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 AQP7O14520 342 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 NKX6-1P78426 367 aaPredicted RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 KLHDC9Q8NEP7 349 aa13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 DCAF13Q9NV06 445 aaKnown RBP13.7□□□□□ -0.22
NOTCH4-201ENST00000375023 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 CBR1P16152 277 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 GPR85P60893 370 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 NHSL2Q5HYW2 709 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 MKXQ8IYA7 352 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 PRRC1Q96M27 445 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 CMSS1Q9BQ75 279 aaKnown RBP13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 TMEM181Q9P2C4 612 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 MT-CO2P00403 227 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 MTCP1P56278 107 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 C19orf47Q8N9M1 422 aaKnown RBP13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 DVL3Q92997 716 aaPredicted RBP13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 MIB2Q96AX9 1013 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 ZBTB8AQ96BR9 441 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 KATNB1Q9BVA0 655 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 SCML1Q9UN30 329 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 SLC35A3Q9Y2D2 325 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 PUS1Q9Y606 427 aaKnown RBP eCLIP13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 TMEM72A0PK05 275 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 WASH4PA8MWX3 477 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 HSBP1L1C9JCN9 74 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 M0R1B8 84 aa13.69□□□□□ -0.22
NOTCH4-201ENST00000375023 HLA-AP01891 365 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms