RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 IRF2P14316 349 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 PGFP49763 221 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 KIR2DS3Q14952 304 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 KIR2DS5Q14953 304 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 OPCMLQ14982 345 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 RBMS2Q15434 407 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 LYPD4Q6UWN0 246 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 ALKAL2Q6UX46 152 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 OR6V1Q8N148 313 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 HLA-CQ95604 372 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 RBM24Q9BX46 236 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 GCM1Q9NP62 436 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 RBFOX1Q9NWB1 397 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 B3GNT2Q9NY97 397 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 UNC80Q8N2C7 3258 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 RFXAPO00287 272 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 DPM1O60762 260 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 PROS1P07225 676 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 BPIFB2Q8N4F0 458 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 BBS1Q8NFJ9 593 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 WFDC5Q8TCV5 224 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 ASB16Q96NS5 453 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 STRADBQ9C0K7 418 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 WASH6PQ9NQA3 447 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 FADS1O60427 444 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 FZD7O75084 574 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 ALDOCP09972 364 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 ETV5P41161 510 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 RRAS2P62070 204 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 MELKQ14680 651 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 AFMIDQ63HM1 303 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 PGAP1Q75T13 922 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 GPR155Q7Z3F1 870 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 SLC35F3Q8IY50 421 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 KLK4Q9Y5K2 254 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 CCDC163A0A0D9SF12 145 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 ARHGAP33O14559 1287 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 GPR137BO60478 399 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 PRKAR1BP31321 381 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 UBE2NP61088 152 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 BEX5Q5H9J7 111 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 STEAP3Q658P3 488 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 LIMS2Q7Z4I7 341 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 OR4F15Q8NGB8 312 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 NANOS1Q8WY41 292 aaKnown RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 LPAR4Q99677 370 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 TCEAL2Q9H3H9 227 aaPredicted RBP11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 GNG13Q9P2W3 67 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 PCDHGA6Q9Y5G7 932 aa11.45□□□□□ -0.58
NPLOC4-202ENST00000374747 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 PPP6CO00743 305 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TNFSF12O43508 249 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 C1orf105O95561 183 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 P04436 131 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 GYPBP06028 91 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 CLDN2P57739 230 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 FOXK1P85037 733 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SLC14A1Q13336 389 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 IL20RBQ6UXL0 311 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TRAPPC6BQ86SZ2 158 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 OR6F1Q8NGZ6 308 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 FAM174AQ8TBP5 190 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TXNDC15Q96J42 360 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 LMF2Q9BU23 707 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 CFHR5Q9BXR6 569 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 ALOXE3Q9BYJ1 711 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 NMNAT2Q9BZQ4 307 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SLC35A3Q9Y2D2 325 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 HEMK1Q9Y5R4 338 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 FAM183AA6NL82 134 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 F5H5K5 113 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 GPRIN2O60269 458 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 ZNF888P0CJ79 500 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 CLDN6P56747 220 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 NFATC4Q14934 902 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 RPL22L1Q6P5R6 122 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 LAX1Q8IWV1 398 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TANKQ92844 425 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 CDS1Q92903 461 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 HHIPQ96QV1 700 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 PAPOLGQ9BWT3 736 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SERTAD4Q9NUC0 356 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 OR52A4PA6NMU1 304 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 CXCL12P48061 93 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 GIPRP48546 466 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TRA2BP62995 288 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 ENTPD8Q5MY95 495 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 OR2G6Q5TZ20 316 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 FOXB2Q5VYV0 432 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 KCNIP4Q6PIL6 250 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 TMEM102Q8N9M5 508 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SENP5Q96HI0 755 aaPredicted RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SNX18Q96RF0 628 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 PSD2Q9BQI7 771 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SLC22A23A1A5C7 686 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 PRSS38A1L453 326 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 MMP2P08253 660 aa11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 PSMB1P20618 241 aaKnown RBP11.44□□□□□ -0.58
NPLOC4-202ENST00000374747 SQSTM1Q13501 440 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms