RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 FGF16O43320 207 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF821O75541 412 aaPredicted RBP11.92□□□□□ -0.5
PRPF4-201ENST00000374198 ACRP10323 421 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 PAX6P26367 422 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 DPP4P27487 766 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 PYCR1P32322 319 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 CXADRP78310 365 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 HSPB3Q12988 150 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 SHHQ15465 462 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 CCSMST1Q4G0I0 132 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 FCRLAQ7L513 359 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TTC9BQ8N6N2 239 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TCTEX1D2Q8WW35 142 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 S100A16Q96FQ6 103 aaKnown RBP11.92□□□□□ -0.5
PRPF4-201ENST00000374198 SEMA4GQ9NTN9 838 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 C2orf42Q9NWW7 574 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
PRPF4-201ENST00000374198 CDHR4A6H8M9 788 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 AP1S1P61966 158 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 PLEKHN1Q494U1 663 aaPredicted RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 C9orf50Q5SZB4 431 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 GLT8D1Q68CQ7 371 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 LIN54Q6MZP7 749 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF561Q8N587 486 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 C15orf54Q8N8G6 183 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 SMPDL3AQ92484 453 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 KISS1RQ969F8 398 aaPredicted RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 TMEM169Q96HH4 297 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ZC3H10Q96K80 434 aaKnown RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 SAMD8Q96LT4 415 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 CAMK1GQ96NX5 476 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 SIRT3Q9NTG7 399 aaPredicted RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 A0A1B0GV90 55 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ARGFXA6NJG6 315 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 RB1P06400 928 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 GKN3PP0CG01 181 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 NDUFV2P19404 249 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 AGAP20933 346 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 PPP2R1BP30154 601 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 FAUP35544 74 aaKnown RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 EIF2S3P41091 472 aaKnown RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 PPP2CBP62714 309 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 PPP2CAP67775 309 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 SLBPQ14493 270 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 TEAD2Q15562 447 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 KLHL26Q53HC5 615 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 BEX5Q5H9J7 111 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 LY6G6FQ5SQ64 297 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF697Q5TEC3 545 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 DEFB128Q7Z7B8 93 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 KLHDC8AQ8IYD2 350 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 RNF113BQ8IZP6 322 aaKnown RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 BEST3Q8N1M1 668 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 OR56A3Q8NH54 315 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 BBS10Q8TAM1 723 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ACOT11Q8WXI4 607 aaPredicted RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 EDEM2Q9BV94 578 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 HCAR1Q9BXC0 346 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 UBQLN3Q9H347 655 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ACKR4Q9NPB9 350 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 NRIP3Q9NQ35 241 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 SMCO4Q9NRQ5 59 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF230Q9UIE0 474 aaPredicted RBP11.91□□□□□ -0.5
PRPF4-201ENST00000374198 ST6GALNAC2Q9UJ37 374 aa11.91□□□□□ -0.5
PRPF4-201ENST00000374198 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 OAZ2O95190 189 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 LY86O95711 162 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 SLC16A8O95907 504 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 CD8AP01732 235 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 MRPL3P09001 348 aaKnown RBP11.9□□□□□ -0.5
PRPF4-201ENST00000374198 EEF1A1P68104 462 aaKnown RBP11.9□□□□□ -0.5
PRPF4-201ENST00000374198 ZNF85Q03923 595 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 C4orf46Q504U0 113 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 EEF1A1P5Q5VTE0 462 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 KRT77Q7Z794 578 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 SMPDL3BQ92485 455 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 MAP3K3Q99759 626 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 GAL3ST1Q99999 423 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 TMEM231Q9H6L2 316 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 ANKRD10Q9NXR5 420 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 OR5H14A6NHG9 310 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 CPSF4LA6NMK7 179 aaKnown RBP11.9□□□□□ -0.5
PRPF4-201ENST00000374198 IFITM5A6NNB3 132 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 RHPN2P1A8MT19 583 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 KLF4O43474 513 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 VEGFDO43915 354 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 FADS1O60427 444 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 RDH16O75452 317 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 IGHV2-5P01817 119 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 PRG2P13727 222 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 ATP1B2P14415 290 aaPredicted RBP11.9□□□□□ -0.5
PRPF4-201ENST00000374198 IMPA1P29218 277 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 ST3GAL3Q11203 375 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 NKAIN4Q8IVV8 208 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 OR4A4PQ8NGN8 299 aa11.9□□□□□ -0.5
PRPF4-201ENST00000374198 OR6N1Q8NGY5 312 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms