RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 MAFAQ8NHW3 353 aaPredicted RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 TMEM239Q8WW34 195 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 LINC01599Q8WXQ3 324 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 DHCR7Q9UBM7 475 aaKnown RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 A0A0B4J2A0 478 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 E7ESA3 106 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 E9PI62 339 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 P2RX1P51575 399 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 TNK1Q13470 666 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 RNF151Q2KHN1 245 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 FAM69AQ5T7M9 428 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 SHEQ5VZ18 495 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 LCN8Q6JVE9 175 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 SHPKQ9UHJ6 478 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 KDM4EB2RXH2 506 aaPredicted RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 DOK2O60496 412 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 CLEC3BP05452 202 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 GLO1Q04760 184 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 CAMK2DQ13557 499 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 BRIX1Q8TDN6 353 aaKnown RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 NAT6Q93015 286 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF845Q96IR2 970 aaPredicted RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 USP3Q9Y6I4 520 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 FABP6P51161 128 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 TAS2R30P59541 319 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 C6orf89Q6UWU4 347 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 LRFN5Q96NI6 719 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 FBXO7Q9Y3I1 522 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 BAXQ07812 192 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ARL16Q0P5N6 197 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ARL6IP1Q15041 203 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 FAM57BQ71RH2 274 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 DCP2Q8IU60 420 aaKnown RBP13.35□□□□□ -0.27
TRAF1-201ENST00000373887 DNAJC5GQ8N7S2 189 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 OR13H1Q8NG92 308 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 PCNPQ8WW12 178 aaKnown RBP13.35□□□□□ -0.27
TRAF1-201ENST00000373887 HSD17B8Q92506 261 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 FN3KRPQ9HA64 309 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 RASD1Q9Y272 281 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 DDX60Q8IY21 1712 aaKnown RBP13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ALS2Q96Q42 1657 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 TRAPPC2LH3BP13 241 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ENKD1Q9H0I2 346 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF286AQ9HBT8 521 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 HRASLSQ9HDD0 168 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 LOC285095A0A1B0GVY8 99 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 NAP1L6A6NFF2 107 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 IL2RGP31785 369 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 AADACL3Q5VUY0 350 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 C18orf63Q68DL7 685 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 FRMD1Q8N878 549 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ZFP90Q8TF47 636 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 PRRC1Q96M27 445 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 BCL7BQ9BQE9 202 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 MYH4Q9Y623 1939 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 DVL1O14640 695 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 CYB5BO43169 146 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 DVL1P1P54792 670 aaPredicted RBP13.35□□□□□ -0.27
TRAF1-201ENST00000373887 VASNQ6EMK4 673 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 SLC7A13Q8TCU3 470 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 EGLN3Q9H6Z9 239 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
TRAF1-201ENST00000373887 ASB4Q9Y574 426 aa13.35□□□□□ -0.27
TRAF1-201ENST00000373887 VASPP50552 380 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SELENOWP63302 87 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 MEF2DQ14814 521 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 TMEM71Q6P5X7 295 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 APOOLQ6UXV4 268 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 CBARPQ8N350 705 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 RBMXL3Q8N7X1 1067 aaKnown RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 PINK1Q9BXM7 581 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 V9GY05 133 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 WFDC5Q8TCV5 224 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF587Q96SQ5 575 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 KIF25Q9UIL4 384 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SRPK3Q9UPE1 567 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 UBBP0CG47 229 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 UBCP0CG48 685 aaKnown RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 IGFBP6P24592 240 aaPredicted RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 LTBQ06643 244 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 PAGE3Q5JUK9 113 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 OGFOD3Q6PK18 319 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SLC22A25Q6T423 547 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 ZFAND1Q8TCF1 268 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 L3HYPDHQ96EM0 354 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 GALNT9Q9HCQ5 603 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 INTS6Q9UL03 887 aaKnown RBP13.34□□□□□ -0.27
TRAF1-201ENST00000373887 H0Y8X5 98 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 SERPINF1P36955 418 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 DEFA6Q01524 100 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 OR6F1Q8NGZ6 308 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF480Q8WV37 535 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 HHATLQ9HCP6 504 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 CACNA1SQ13698 1873 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 FAM183AA6NL82 134 aa13.34□□□□□ -0.27
TRAF1-201ENST00000373887 H0YGG7 62 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms