RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 GATBO75879 557 aaKnown RBP15.07■□□□□ 0
SDC4-201ENST00000372733 KRT33AO76009 404 aa15.07■□□□□ 0
SDC4-201ENST00000372733 GPR89BP0CG08 455 aa15.07■□□□□ 0
SDC4-201ENST00000372733 POU3F2P20265 443 aaPredicted RBP15.07■□□□□ 0
SDC4-201ENST00000372733 CAPZA2P47755 286 aa15.07■□□□□ 0
SDC4-201ENST00000372733 SYS1Q8N2H4 156 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ZNF559Q9BR84 538 aa15.07■□□□□ 0
SDC4-201ENST00000372733 RNF208Q9H0X6 261 aa15.07■□□□□ 0
SDC4-201ENST00000372733 TMEM27Q9HBJ8 222 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ZNF275Q9NSD4 429 aaPredicted RBP15.07■□□□□ 0
SDC4-201ENST00000372733 KLHL9Q9P2J3 617 aa15.07■□□□□ 0
SDC4-201ENST00000372733 NCDNQ9UBB6 729 aa15.07■□□□□ 0
SDC4-201ENST00000372733 ADAM18Q9Y3Q7 739 aa15.07■□□□□ 0
SDC4-201ENST00000372733 A0A1W2PP55 124 aa15.06■□□□□ 0
SDC4-201ENST00000372733 IFITM5A6NNB3 132 aa15.06■□□□□ 0
SDC4-201ENST00000372733 TSPAN4O14817 238 aa15.06■□□□□ 0
SDC4-201ENST00000372733 FMO6PO60774 539 aa15.06■□□□□ 0
SDC4-201ENST00000372733 GRPRP30550 384 aa15.06■□□□□ 0
SDC4-201ENST00000372733 RPS15P62841 145 aaKnown RBP15.06■□□□□ 0
SDC4-201ENST00000372733 LINC00303Q3SY05 128 aa15.06■□□□□ 0
SDC4-201ENST00000372733 GXYLT1Q4G148 440 aa15.06■□□□□ 0
SDC4-201ENST00000372733 ZC3H14Q6PJT7 736 aaKnown RBP15.06■□□□□ 0
SDC4-201ENST00000372733 SMARCD2Q92925 531 aa15.06■□□□□ 0
SDC4-201ENST00000372733 LCORQ96JN0 433 aaPredicted RBP15.06■□□□□ 0
SDC4-201ENST00000372733 CXorf58Q96LI9 332 aa15.06■□□□□ 0
SDC4-201ENST00000372733 BAIAP2Q9UQB8 552 aa15.06■□□□□ 0
SDC4-201ENST00000372733 PRR19A6NJB7 356 aa15.06■□□□□ 0
SDC4-201ENST00000372733 GABARAPH6UMI1 98 aa15.06■□□□□ 0
SDC4-201ENST00000372733 TRIM77I1YAP6 450 aa15.06■□□□□ 0
SDC4-201ENST00000372733 L7N2F9 121 aa15.06■□□□□ 0
SDC4-201ENST00000372733 EML2O95834 649 aa15.06■□□□□ 0
SDC4-201ENST00000372733 SLC35G6P0C7Q6 338 aa15.06■□□□□ 0
SDC4-201ENST00000372733 OR2T7P0C7T2 308 aa15.06■□□□□ 0
SDC4-201ENST00000372733 SRMP19623 302 aa15.06■□□□□ 0
SDC4-201ENST00000372733 DPP4P27487 766 aa15.06■□□□□ 0
SDC4-201ENST00000372733 DCTDP32321 178 aa15.06■□□□□ 0
SDC4-201ENST00000372733 NHLRC3Q5JS37 347 aa15.06■□□□□ 0
SDC4-201ENST00000372733 OR5M10Q6IEU7 315 aa15.06■□□□□ 0
SDC4-201ENST00000372733 RPL22L1Q6P5R6 122 aaKnown RBP15.06■□□□□ 0
SDC4-201ENST00000372733 ZNF613Q6PF04 617 aa15.06■□□□□ 0
SDC4-201ENST00000372733 KIAA1324Q6UXG2 1013 aaKnown RBP15.06■□□□□ 0
SDC4-201ENST00000372733 NHLRC1Q6VVB1 395 aa15.06■□□□□ 0
SDC4-201ENST00000372733 C3P1Q6ZMU1 363 aa15.06■□□□□ 0
SDC4-201ENST00000372733 FAM71CQ8NEG0 241 aa15.06■□□□□ 0
SDC4-201ENST00000372733 OR2T27Q8NH04 317 aa15.06■□□□□ 0
SDC4-201ENST00000372733 MOSPD2Q8NHP6 518 aa15.06■□□□□ 0
SDC4-201ENST00000372733 LCN9Q8WX39 176 aa15.06■□□□□ 0
SDC4-201ENST00000372733 ZNF707Q96C28 371 aaPredicted RBP15.06■□□□□ 0
SDC4-201ENST00000372733 CAPNS2Q96L46 248 aa15.06■□□□□ 0
SDC4-201ENST00000372733 FKRPQ9H9S5 495 aa15.06■□□□□ 0
SDC4-201ENST00000372733 LIN7BQ9HAP6 207 aa15.06■□□□□ 0
SDC4-201ENST00000372733 NOX3Q9HBY0 568 aa15.06■□□□□ 0
SDC4-201ENST00000372733 C2orf42Q9NWW7 574 aa15.06■□□□□ 0
SDC4-201ENST00000372733 SDHAF2Q9NX18 166 aa15.06■□□□□ 0
SDC4-201ENST00000372733 ICAM5Q9UMF0 924 aa15.06■□□□□ 0
SDC4-201ENST00000372733 DAPP1Q9UN19 280 aa15.06■□□□□ 0
SDC4-201ENST00000372733 IER3IP1Q9Y5U9 82 aa15.06■□□□□ 0
SDC4-201ENST00000372733 CDH23Q9H251 3354 aa15.05■□□□□ 0
SDC4-201ENST00000372733 PLSCR5A0PG75 271 aa15.05■□□□□ 0
SDC4-201ENST00000372733 POM121CA8CG34 1229 aa15.05■□□□□ 0
SDC4-201ENST00000372733 ZNF879B4DU55 563 aa15.05■□□□□ 0
SDC4-201ENST00000372733 MCIDASD6RGH6 385 aa15.05■□□□□ 0
SDC4-201ENST00000372733 FGF17O60258 216 aa15.05■□□□□ 0
SDC4-201ENST00000372733 HOXD4P09016 255 aaPredicted RBP15.05■□□□□ 0
SDC4-201ENST00000372733 GABRA3P34903 492 aa15.05■□□□□ 0
SDC4-201ENST00000372733 PTH2RP49190 550 aa15.05■□□□□ 0
SDC4-201ENST00000372733 MNX1P50219 401 aaPredicted RBP15.05■□□□□ 0
SDC4-201ENST00000372733 HTR4Q13639 388 aa15.05■□□□□ 0
SDC4-201ENST00000372733 CST6Q15828 149 aa15.05■□□□□ 0
SDC4-201ENST00000372733 ELFN2Q5R3F8 820 aa15.05■□□□□ 0
SDC4-201ENST00000372733 SFRP5Q5T4F7 317 aa15.05■□□□□ 0
SDC4-201ENST00000372733 GLDNQ6ZMI3 551 aaPredicted RBP15.05■□□□□ 0
SDC4-201ENST00000372733 USP53Q70EK8 1073 aa15.05■□□□□ 0
SDC4-201ENST00000372733 PRSS41Q7RTY9 318 aa15.05■□□□□ 0
SDC4-201ENST00000372733 SAMD14Q8IZD0 417 aaPredicted RBP15.05■□□□□ 0
SDC4-201ENST00000372733 TMEM52Q8NDY8 209 aa15.05■□□□□ 0
SDC4-201ENST00000372733 ZPLD1Q8TCW7 415 aa15.05■□□□□ 0
SDC4-201ENST00000372733 RIT1Q92963 219 aa15.05■□□□□ 0
SDC4-201ENST00000372733 GPR174Q9BXC1 333 aa15.05■□□□□ 0
SDC4-201ENST00000372733 MFRPQ9BY79 579 aa15.05■□□□□ 0
SDC4-201ENST00000372733 REG4Q9BYZ8 158 aa15.05■□□□□ 0
SDC4-201ENST00000372733 CHRNA9Q9UGM1 479 aa15.05■□□□□ 0
SDC4-201ENST00000372733 MRPS2Q9Y399 296 aaKnown RBP15.05■□□□□ 0
SDC4-201ENST00000372733 KCNMB2Q9Y691 235 aa15.05■□□□□ 0
SDC4-201ENST00000372733 DNAH14Q0VDD8 3507 aa15.05■□□□□ -0
SDC4-201ENST00000372733 AIPO00170 330 aa15.05■□□□□ -0
SDC4-201ENST00000372733 ZNF749O43361 778 aa15.05■□□□□ -0
SDC4-201ENST00000372733 GNRH1P01148 92 aa15.05■□□□□ -0
SDC4-201ENST00000372733 EMDP50402 254 aa15.05■□□□□ -0
SDC4-201ENST00000372733 RPS15AP62244 130 aaKnown RBP15.05■□□□□ -0
SDC4-201ENST00000372733 PPP2CBP62714 309 aa15.05■□□□□ -0
SDC4-201ENST00000372733 PPP2CAP67775 309 aa15.05■□□□□ -0
SDC4-201ENST00000372733 FAM198BQ6UWH4 519 aa15.05■□□□□ -0
SDC4-201ENST00000372733 SPRED2Q7Z698 418 aa15.05■□□□□ -0
SDC4-201ENST00000372733 MEIOBQ8N635 442 aa15.05■□□□□ -0
SDC4-201ENST00000372733 RGP1Q92546 391 aaPredicted RBP15.05■□□□□ -0
SDC4-201ENST00000372733 DUSP22Q9NRW4 184 aa15.05■□□□□ -0
SDC4-201ENST00000372733 KLF15Q9UIH9 416 aa15.05■□□□□ -0
SDC4-201ENST00000372733 KIF25Q9UIL4 384 aa15.05■□□□□ -0
SDC4-201ENST00000372733 PCDHGA5Q9Y5G8 931 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms