RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 RPS7P62081 194 aaKnown RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 RPS4XP62701 263 aaKnown RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 MISPQ8IVT2 679 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 KLHL36Q8N4N3 616 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 MCFD2Q8NI22 146 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 THAP3Q8WTV1 239 aaPredicted RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 ARHGAP9Q9BRR9 750 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 OR51V1Q9H2C8 321 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 ERVK13-1Q9NX77 482 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 IER3IP1Q9Y5U9 82 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 SPIN1Q9Y657 262 aaPredicted RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 DMDP11532 3685 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 J3QRE1 110 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 FLRT2O43155 660 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 TGM1P22735 817 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 CD40LGP29965 261 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 SLC26A5P58743 744 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 C16orf47Q6ZP98 133 aaPredicted RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 C10orf53Q8N6V4 93 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 KISS1RQ969F8 398 aaPredicted RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 C8orf44Q96CB5 159 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 TEAD3Q99594 435 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 EXOSC4Q9NPD3 245 aaKnown RBP22.78■■□□□ 1.24
CTSA-203ENST00000372459 NANSQ9NR45 359 aa22.78■■□□□ 1.24
CTSA-203ENST00000372459 METTL15A6NJ78 407 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 CDC40O60508 579 aaKnown RBP eCLIP22.77■■□□□ 1.247e-7■■■■■ 33.2
CTSA-203ENST00000372459 AVPR2P30518 371 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 PPP5CP53041 499 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 EGR4Q05215 589 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 ZNF404Q494X3 552 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 TUBA3EQ6PEY2 450 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 B3GLCTQ6Y288 498 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 NUP54Q7Z3B4 507 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 CYB561A3Q8NBI2 242 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 OR52E2Q8NGJ4 325 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 OR52N1Q8NH53 320 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 ZNF649Q9BS31 505 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 MMP25Q9NPA2 562 aa22.77■■□□□ 1.24
CTSA-203ENST00000372459 CCDC59Q9P031 241 aaKnown RBP22.77■■□□□ 1.24
CTSA-203ENST00000372459 ZC3H12DA2A288 527 aaKnown RBP22.76■■□□□ 1.23
CTSA-203ENST00000372459 CCDC182A6NF36 153 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 GP1BBP13224 206 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 SLC2A5P22732 501 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 CXCR1P25024 350 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 SLC16A1P53985 500 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 TOMM34Q15785 309 aaPredicted RBP22.76■■□□□ 1.23
CTSA-203ENST00000372459 PLEKHG7Q6ZR37 379 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 FAM98AQ8NCA5 519 aaKnown RBP22.76■■□□□ 1.23
CTSA-203ENST00000372459 ZNF485Q8NCK3 441 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 TM9SF4Q92544 642 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 UFD1Q92890 307 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 TMCO6Q96DC7 493 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 NRIP3Q9NQ35 241 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 C17orf51A8MQB3 221 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 WWP2O00308 870 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 ZFAND5O76080 213 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 HIST1H1CP16403 213 aaKnown RBP22.76■■□□□ 1.23
CTSA-203ENST00000372459 CRYBB2P43320 205 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 TPBGQ13641 420 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 ACBD7Q8N6N7 88 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 MR1Q95460 341 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 GPX7Q96SL4 187 aaPredicted RBP22.76■■□□□ 1.23
CTSA-203ENST00000372459 ULBP3Q9BZM4 244 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 SSR3Q9UNL2 185 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 HIF3AQ9Y2N7 669 aa22.76■■□□□ 1.23
CTSA-203ENST00000372459 ARPC3O15145 178 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 NAGAP17050 411 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 FBXW4P57775 412 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 CBX3Q13185 183 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 ISXQ2M1V0 245 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 FAM199XQ6PEV8 388 aaPredicted RBP22.75■■□□□ 1.23
CTSA-203ENST00000372459 SDR9C7Q8NEX9 313 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 OR4K13Q8NH42 304 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 NXF2Q9GZY0 626 aaKnown RBP22.75■■□□□ 1.23
CTSA-203ENST00000372459 SLC39A1Q9NY26 324 aa22.75■■□□□ 1.23
CTSA-203ENST00000372459 TMEM200CA6NKL6 621 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 C12orf71A8MTZ7 269 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 TAF4O00268 1085 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 IDH3BO43837 385 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 CD79BP40259 229 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 DUSP19Q8WTR2 217 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 KTI12Q96EK9 354 aaPredicted RBP22.74■■□□□ 1.23
CTSA-203ENST00000372459 MOGAT1Q96PD6 335 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 INPP5EQ9NRR6 644 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 HAO2Q9NYQ3 351 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 AKAP7Q9P0M2 348 aaPredicted RBP22.74■■□□□ 1.23
CTSA-203ENST00000372459 CAB39Q9Y376 341 aaPredicted RBP22.74■■□□□ 1.23
CTSA-203ENST00000372459 ADAM18Q9Y3Q7 739 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 LNP1A1A4G5 178 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 C9J4A7 227 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 BLOC1S5-TXNDC5H3BN57 136 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 ZNF354AO60765 605 aaPredicted RBP22.74■■□□□ 1.23
CTSA-203ENST00000372459 ASAH2BP0C7U1 165 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 CLUP10909 449 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 CCKBRP32239 447 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 ACSM1Q08AH1 577 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 GXYLT1Q4G148 440 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 AGAP7PQ5VUJ5 663 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 TMPRSS11AQ6ZMR5 421 aa22.74■■□□□ 1.23
CTSA-203ENST00000372459 CMKLR1Q99788 373 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms