RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CASP12Q6UXS9 341 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 DEPDC4Q8N2C3 294 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 C17orf78Q8N4C9 275 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 TRIML2Q8N7C3 387 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ELOA3Q8NG57 546 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 WDR60Q8WVS4 1066 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 PANX1Q96RD7 426 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 INPP5KQ9BT40 448 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ADAM19Q9H013 955 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 SLC17A5Q9NRA2 495 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 SLC7A10Q9NS82 523 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 AIG1Q9NVV5 245 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 POU2F3Q9UKI9 436 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 PRDM4Q9UKN5 801 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 AMDHD2Q9Y303 409 aa14.05□□□□□ -0.16
CKS1B-202ENST00000368436 ZC3H12DA2A288 527 aaKnown RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 FAM234BA2RU67 622 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 CFAP73A6NFT4 308 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 A8MV72 311 aaPredicted RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 H7C417 338 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 SDHDO14521 159 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 GPRIN2O60269 458 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 PGRP06401 933 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 DBIP07108 87 aaKnown RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 IL12AP29459 219 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 CDKN2CP42773 168 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 ANXA11P50995 505 aaKnown RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 NME5P56597 212 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 SLC25A3Q00325 362 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 LOXL1Q08397 574 aaPredicted RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 LRRC74AQ0VAA2 488 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 EPS8Q12929 822 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 GNA13Q14344 377 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 RAB35Q15286 201 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 MAPK11Q15759 364 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 GSTA3Q16772 222 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 MRPL2Q5T653 305 aaKnown RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 PODNL1Q6PEZ8 512 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 CLEC2AQ6UVW9 174 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 SPATA19Q7Z5L4 167 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 LSRQ86X29 649 aaPredicted RBP14.04□□□□□ -0.16
CKS1B-202ENST00000368436 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 TMEM45BQ96B21 275 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 BOD1Q96IK1 185 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 C1QTNF6Q9BXI9 259 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 UPB1Q9UBR1 384 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 GPR45Q9Y5Y3 372 aa14.04□□□□□ -0.16
CKS1B-202ENST00000368436 MXRA5Q9NR99 2828 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 HAX1O00165 279 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 GSNP06396 782 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 IL7RP16871 459 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 TGFBR3Q03167 851 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 BST1Q10588 318 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 COX20Q5RI15 118 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 ZNF621Q6ZSS3 439 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 ZIC4Q8N9L1 334 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 OR52E6Q96RD3 313 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 TNFRSF13CQ96RJ3 184 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 SF3B5Q9BWJ5 86 aaKnown RBP14.03□□□□□ -0.16
CKS1B-202ENST00000368436 PIF1Q9H611 641 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 CUBNO60494 3623 aa14.03□□□□□ -0.16
CKS1B-202ENST00000368436 ARFGEF3Q5TH69 2177 aa14.02□□□□□ -0.16
CKS1B-202ENST00000368436 DSPPQ9NZW4 1301 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 CDHR4A6H8M9 788 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 LIPT2A6NK58 231 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 KRT75O95678 551 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 IFNA2P01563 188 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 NR2F1P10589 423 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 UQCRBP14927 111 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 MPGP29372 298 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 ACAA2P42765 397 aaKnown RBP14.02□□□□□ -0.17
CKS1B-202ENST00000368436 MVDP53602 400 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 CEACAM7Q14002 265 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM249Q2WGJ8 235 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 OTUD3Q5T2D3 398 aaPredicted RBP14.02□□□□□ -0.17
CKS1B-202ENST00000368436 C6orf52Q5T4I8 152 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 C9orf135Q5VTT2 229 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 PEX5LQ8IYB4 626 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF440Q8IYI8 595 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 TMEM99Q8N816 258 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 OR9K2Q8NGE7 335 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 FKRPQ9H9S5 495 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 RLIMQ9NVW2 624 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 ATP23Q9Y6H3 246 aa14.02□□□□□ -0.17
CKS1B-202ENST00000368436 AQP7P3A6NL99 342 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 AKR7A3O95154 331 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 GPIP06744 558 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 SLC25A16P16260 332 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 APOBEC3AP31941 199 aaPredicted RBP14.01□□□□□ -0.17
CKS1B-202ENST00000368436 PRPS1P60891 318 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 VLDLRP98155 873 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 CHRNB3Q05901 458 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 CHRFAM7AQ494W8 412 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 AAED1Q7RTV5 226 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF525Q8N782 197 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 POMGNT2Q8NAT1 580 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 GLB1L3Q8NCI6 653 aaPredicted RBP14.01□□□□□ -0.17
CKS1B-202ENST00000368436 PNPT1Q8TCS8 783 aaKnown RBP14.01□□□□□ -0.17
CKS1B-202ENST00000368436 HTRA1Q92743 480 aa14.01□□□□□ -0.17
CKS1B-202ENST00000368436 ZNF385AQ96PM9 386 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms