RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 SERPINB8P50452 374 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 SEC24CP53992 1094 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 OR2B6P58173 313 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 MVKQ03426 396 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 NAB1Q13506 487 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 DAG1Q14118 895 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ATP6AP1LQ52LC2 224 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF385BQ569K4 471 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 DCST2Q5T1A1 773 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ABHD12BQ7Z5M8 362 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ZIC4Q8N9L1 334 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 MAGEE2Q8TD90 523 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 AURKBQ96GD4 344 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 EGLN2Q96KS0 407 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF385AQ96PM9 386 aaKnown RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ZNF382Q96SR6 550 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 GPA33Q99795 319 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 PIGUQ9H490 435 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 CTPS2Q9NRF8 586 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 ACER3Q9NUN7 267 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 SNX24Q9Y343 169 aa12.53□□□□□ -0.4
VAMP4-202ENST00000367740 SPIN1Q9Y657 262 aaPredicted RBP12.53□□□□□ -0.4
VAMP4-202ENST00000367740 A0A096LPE4 126 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 A0A1W2PPZ6 126 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 TIMM23O14925 209 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 EIF3HO15372 352 aaKnown RBP eCLIP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 HMGN2P05204 90 aaKnown RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 VSIG8P0DPA2 414 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 FRKP42685 505 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 LASP1Q14847 261 aaKnown RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 MAD2L1BPQ15013 274 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 PDZK1Q5T2W1 519 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 REP15Q6BDI9 236 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 ASPHD2Q6ICH7 369 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 GPRIN3Q6ZVF9 776 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 SPATC1Q76KD6 591 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 LINGO2Q7L985 606 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 KIR3DL3Q8N743 410 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 ZFP28Q8NHY6 868 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 FAM120BQ96EK7 910 aaKnown RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF317Q96PQ6 595 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 ALKBH3Q96Q83 286 aaPredicted RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 KCNA7Q96RP8 456 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 LAT2Q9GZY6 243 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 MOV10Q9HCE1 1003 aaKnown RBP12.52□□□□□ -0.41
VAMP4-202ENST00000367740 MID2Q9UJV3 735 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 NUP50Q9UKX7 468 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 TIMM22Q9Y584 194 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF503-AS2A6NEH8 195 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF587BE7ETH6 402 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 SCAMP2O15127 329 aaKnown RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 CYP7B1O75881 506 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 TSPAN15O95858 294 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 SBK3P0C264 359 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 STX2P32856 288 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 PCGF2P35227 344 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 APOBEC1P41238 236 aaKnown RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 KRTAP10-3P60369 221 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 GUCY2DQ02846 1103 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 BEAN1Q3B7T3 259 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 ARMCX4Q5H9R4 360 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 KLF17Q5JT82 389 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 RELL1Q8IUW5 271 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 MRRFQ96E11 262 aaKnown RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 ZNF764Q96H86 408 aaPredicted RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 SYT3Q9BQG1 590 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 PLEK2Q9NYT0 353 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 TMEM181Q9P2C4 612 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 MYEF2Q9P2K5 600 aaKnown RBP12.51□□□□□ -0.41
VAMP4-202ENST00000367740 SNX12Q9UMY4 172 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 TRAPPC4Q9Y296 219 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 KCNE3Q9Y6H6 103 aa12.51□□□□□ -0.41
VAMP4-202ENST00000367740 CENPVL1A0A0U1RR11 272 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 A0A1B0GUS0 222 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 SERTM1A2A2V5 107 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 URI1O94763 535 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 IMPDH2P12268 514 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 CBR1P16152 277 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 PTMSP20962 102 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 NR4A1P22736 598 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 NPRL3Q12980 569 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 OTUD3Q5T2D3 398 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 LRP11Q86VZ4 500 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 ADGRG3Q86Y34 549 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 GSPT2Q8IYD1 628 aaKnown RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 DEFB108BQ8NET1 73 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 OR9K2Q8NGE7 335 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 POP5Q969H6 163 aaKnown RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 RSPO3Q9BXY4 272 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 IQCGQ9H095 443 aaKnown RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 SIRT3Q9NTG7 399 aaPredicted RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 ZCCHC3Q9NUD5 404 aaKnown RBP12.5□□□□□ -0.41
VAMP4-202ENST00000367740 GRHL1Q9NZI5 618 aa12.5□□□□□ -0.41
VAMP4-202ENST00000367740 KCNE5Q9UJ90 142 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms