RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 SMN1Q16637 294 aaKnown RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 LINC00696Q6ZRV3 163 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PLEKHM3Q6ZWE6 761 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 GDF7Q7Z4P5 450 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 P3H2Q8IVL5 708 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 CMIPQ8IY22 773 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 GALNT16Q8N428 558 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 ATG16L2Q8NAA4 619 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 IP6K3Q96PC2 410 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 EPYCQ99645 322 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 GABARAPL3Q9BY60 117 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 TP63Q9H3D4 680 aaPredicted RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 STMN3Q9NZ72 180 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 SLC7A7Q9UM01 511 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 ICAM5Q9UMF0 924 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 SLC35A3Q9Y2D2 325 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 CRYZL1O95825 349 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 LCKP06239 509 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 H1F0P07305 194 aaKnown RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 LCN1P31025 176 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 HMGA2P52926 109 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 C19orf57Q0VDD7 668 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 COLEC12Q5KU26 742 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PODNL1Q6PEZ8 512 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 OPN5Q6U736 354 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 RANBP3LQ86VV4 465 aaPredicted RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 CADM2Q8N3J6 435 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 CAPSLQ8WWF8 208 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 RPL3LQ92901 407 aaKnown RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 TMCO6Q96DC7 493 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 SLC41A3Q96GZ6 507 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 FER1L6-AS2Q96M78 137 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PRSS27Q9BQR3 290 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 FNDC11Q9BVV2 318 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 SH2D2AQ9NP31 389 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 ABCB10Q9NRK6 738 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PLA2G3Q9NZ20 509 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 KLRF1Q9NZS2 232 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 CCDC59Q9P031 241 aaKnown RBP11.13□□□□□ -0.63
CAPN9-203ENST00000366666 AASSQ9UDR5 926 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PSORS1C1Q9UIG5 152 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 RNF6Q9Y252 685 aa11.13□□□□□ -0.63
CAPN9-203ENST00000366666 PRRC2CQ9Y520 2896 aaKnown RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 A0A0G2JMM0 328 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1B0GWA3 101 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1W2PPB8 328 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1W2PRS3 328 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 KIR3DP1A8MWS1 328 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 GNB5O14775 395 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 SNPHO15079 494 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 SNX4O95219 450 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 POU2F1P14859 743 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 EIF2S3P41091 472 aaKnown RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 IDH2P48735 452 aaKnown RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 GNG2P59768 71 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 PSPHP78330 225 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 DEFB109BQ30KR1 87 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 SPINK14Q6IE38 97 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 AHSA2Q719I0 299 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 CCDC71Q8IV32 467 aaPredicted RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 ENTHD1Q8IYW4 607 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 POC5Q8NA72 575 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 ZNF248Q8NDW4 579 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 KBTBD8Q8NFY9 601 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 APH1BQ8WW43 257 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 TTC9Q92623 222 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 CCNL2Q96S94 520 aaPredicted RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 COPS4Q9BT78 406 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 METTL7AQ9H8H3 244 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 POLE4Q9NR33 117 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 HPF1Q9NWY4 346 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 MED11Q9P086 117 aa11.12□□□□□ -0.63
CAPN9-203ENST00000366666 TESQ9UGI8 421 aaKnown RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 TMA7Q9Y2S6 64 aaKnown RBP11.12□□□□□ -0.63
CAPN9-203ENST00000366666 A0A087WUU8 490 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 PIP5K1CO60331 668 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 S100A5P33763 92 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 LIPAP38571 399 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 CD96P40200 585 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 CCL11P51671 97 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 COL28A1Q2UY09 1125 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 RFPL4BQ6ZWI9 263 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 SLC46A3Q7Z3Q1 461 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 THAP4Q8WY91 577 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 RELTQ969Z4 430 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 SIGLEC12Q96PQ1 595 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 SNX18Q96RF0 628 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 FEVQ99581 238 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 NIPSNAP1Q9BPW8 284 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 RHNO1Q9BSD3 238 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 HES7Q9BYE0 225 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 LAT2Q9GZY6 243 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 RASSF1Q9NS23 344 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 FKBP14Q9NWM8 211 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 RABL2BQ9UNT1 228 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 A0A0B4J2E0 115 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1B0GX12 115 aa11.11□□□□□ -0.63
CAPN9-203ENST00000366666 A0A1W2PRQ8 180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms