RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 ZNF100Q8IYN0 542 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ZIC4Q8N9L1 334 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TMEM171Q8WVE6 324 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 APH1AQ96BI3 265 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ATP6V1G3Q96LB4 118 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 MUS81Q96NY9 551 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 AMBRA1Q9C0C7 1298 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 A4GALTQ9NPC4 353 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TCF7L2Q9NQB0 619 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SLC25A37Q9NYZ2 338 aa12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ZNF443Q9Y2A4 671 aaPredicted RBP12.05□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CADP27708 2225 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TRBV5-3A0A0A0MS03 114 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LIPT2A6NK58 231 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SHISA9B4DS77 424 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 H7C1Q1 480 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CLIC1O00299 241 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 MRPL33O75394 65 aaKnown RBP12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 HEXAP06865 529 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ITGA5P08648 1049 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PRG2P13727 222 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 UQCRBP14927 111 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ADSLP30566 484 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LTBQ06643 244 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 FADDQ13158 208 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 GABRA6Q16445 453 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PGGHGQ32M88 737 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TTMPQ5BVD1 217 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 RPS26P11Q5JNZ5 115 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 WBP2NLQ6ICG8 309 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ALKBH2Q6NS38 261 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SLC35B4Q969S0 331 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 FBXW5Q969U6 566 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 BOD1Q96IK1 185 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 NAA11Q9BSU3 229 aaPredicted RBP12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CCDC28BQ9BUN5 200 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 BDH2Q9BUT1 245 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SPATA9Q9BWV2 254 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 GRIP2Q9C0E4 1043 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CXorf56Q9H5V9 222 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 OCEL1Q9H607 264 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SLAMF8Q9P0V8 285 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LAMP3Q9UQV4 416 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 USF3Q68DE3 2245 aa12.04□□□□□ -0.48
TNFRSF1A-202ENST00000366159 A0A096LPI6 279 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TRIM64A6NGJ6 449 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TRIM64BA6NI03 449 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TMEM229AB2RXF0 380 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CLOCKO15516 846 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 FZD7O75084 574 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LY6G6DO95868 133 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CD8AP01732 235 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 IGHV3-9P01782 118 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 RPS4XP62701 263 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CEACAM7Q14002 265 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LARS2Q15031 903 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 STK11Q15831 433 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PAGE3Q5JUK9 113 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 C6orf10Q5SRN2 563 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 C10orf111Q8N326 155 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TMEM99Q8N816 258 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 KBTBD8Q8NFY9 601 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SMAP2Q8WU79 429 aaPredicted RBP12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 MAL2Q969L2 176 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TMEM45BQ96B21 275 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 C3orf49Q96BT1 292 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SF3B5Q9BWJ5 86 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PIF1Q9H611 641 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TMEM45AQ9NWC5 275 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PARPBPQ9NWS1 579 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ASB6Q9NWX5 421 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TAS2R16Q9NYV7 291 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 SLC9A8Q9Y2E8 581 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 IFT52Q9Y366 437 aa12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 FN1P02751 2386 aaKnown RBP12.03□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ANK3Q12955 4377 aaKnown RBP12.02□□□□□ -0.48
TNFRSF1A-202ENST00000366159 AQP7P3A6NL99 342 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 A8MVM7 634 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 FAM171A2A8MVW0 826 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 POLR3GO15318 223 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 RAD51DO75771 328 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 GPIP06744 558 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 CXCR1P25024 350 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 IDUAP35475 653 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 FAPQ12884 760 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 BNIP2Q12982 314 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 OTUD3Q5T2D3 398 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 Q71RC1 249 aaPredicted RBP12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 SERPINA11Q86U17 422 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 DTX2Q86UW9 622 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 UBE2J2Q8N2K1 259 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 WDR31Q8NA23 367 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 OR52E4Q8NGH9 312 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 LRRC8CQ8TDW0 803 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 STON2Q8WXE9 905 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 MUCL1Q96DR8 90 aa12.02□□□□□ -0.49
TNFRSF1A-202ENST00000366159 RAD21L1Q9H4I0 556 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms