RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 RAP1AP62834 184 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 RIPK1Q13546 671 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 LAGE3Q14657 143 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 KIAA0087Q14695 138 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 ATP6AP1Q15904 470 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 SLC10A5Q5PT55 438 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 SLC39A4Q6P5W5 647 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 FAM199XQ6PEV8 388 aaPredicted RBP0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 LINC00696Q6ZRV3 163 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 LRRC52Q8N7C0 313 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 APCDD1LQ8NCL9 501 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR2L3Q8NG85 312 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR9G1Q8NH87 305 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 TCTEX1D2Q8WW35 142 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 TIMM29Q9BSF4 260 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 NACA2Q9H009 215 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 DDX47Q9H0S4 455 aaKnown RBP0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 SMYD3Q9H7B4 428 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 SIAEQ9HAT2 523 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 GLRX2Q9NS18 164 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 CLCF1Q9UBD9 225 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 COPS7AQ9UBW8 275 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF337Q9Y3M9 751 aa0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF469Q96JG9 3925 aaPredicted RBP0.15□□□□□ -2.39
RNU6-238P-201ENST00000363313 ANKRD17O75179 2603 aaKnown RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 SPECC1L-ADORA2AF8WAN1 911 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 SGK1O00141 431 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 STX11O75558 287 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 BGLAPP02818 100 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 CMA1P23946 247 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 PTPN6P29350 595 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 HTR5AP47898 357 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 SMSP52788 366 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 STX1BP61266 288 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 TIGITQ495A1 244 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 CCDC137Q6PK04 289 aaKnown RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 RDH10Q8IZV5 341 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 LGI3Q8N145 548 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR1N2Q8NGR9 330 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR2G3Q8NGZ4 309 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 CCNL2Q96S94 520 aaPredicted RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 CRNKL1Q9BZJ0 848 aaKnown RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 TRIM45Q9H8W5 580 aaPredicted RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 GPN2Q9H9Y4 310 aaPredicted RBP0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 SGK2Q9HBY8 427 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 NEK6Q9HC98 313 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 TRPV5Q9NQA5 729 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 GPATCH2LQ9NWQ4 482 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 CD84Q9UIB8 345 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 VWDEQ8N2E2 1590 aa0.14□□□□□ -2.39
RNU6-238P-201ENST00000363313 C5orf63A6NC05 138 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 C5orf51A6NDU8 294 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 WASHC1A8K0Z3 465 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 PHGR1C9JFL3 82 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 H0YHG0 523 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 RAD51BO15315 384 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 SMIM10L1P0DMW3 83 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 IFI30P13284 250 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 AREGP15514 252 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 GNSP15586 552 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 TCF7P36402 384 aaPredicted RBP0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 OPRK1P41145 380 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 NAMPTP43490 491 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 VDAC2P45880 294 aaPredicted RBP0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 PITPNBP48739 271 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 PRKCDQ05655 676 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 RGS1Q08116 209 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 PIGHQ14442 188 aaPredicted RBP0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 SLC5A12Q1EHB4 618 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 AARDQ4LEZ3 155 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 MORN3Q6PF18 240 aaPredicted RBP0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 LRRC17Q8N6Y2 441 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 STKLD1Q8NE28 680 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 ZNF680Q8NEM1 530 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 OR56B4Q8NH76 319 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 SMIM10Q96HG1 83 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 TMEM246Q9BRR3 403 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 CHAC1Q9BUX1 264 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 CTPS2Q9NRF8 586 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 DHCR7Q9UBM7 475 aaKnown RBP0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 LIPT1Q9Y234 373 aa0.13□□□□□ -2.39
RNU6-238P-201ENST00000363313 CCDC7Q96M83 1385 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TMEM89A2RUT3 159 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 H3BMQ9 156 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 FCN1O00602 326 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TBCAO75347 108 aaKnown RBP0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 CD74P04233 296 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 APOA4P06727 396 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 CXCR2P25025 360 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 RFC4P35249 363 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 BIDP55957 195 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 NTHL1P78549 312 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 GALK2Q01415 458 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 IHHQ14623 411 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 SGCAQ16586 387 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 GUCA2BQ16661 112 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TYSND1Q2T9J0 566 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 NSUN5P1Q3KNT7 163 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TMEM52BQ4KMG9 183 aa0.12□□□□□ -2.39
RNU6-238P-201ENST00000363313 TIGD3Q6B0B8 471 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms