RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CACNA1CQ13936 2221 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 PLXNA1Q9UIW2 1896 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 PRKNO60260 465 aaPredicted RBP12.8□□□□□ -0.36
CTR9-201ENST00000361367 ECH1Q13011 328 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 SQSTM1Q13501 440 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 ATAD3CQ5T2N8 411 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 FAM69AQ5T7M9 428 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 PRAMEF17Q5VTA0 474 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 TMEM53Q6P2H8 277 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 TMIGD2Q96BF3 282 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 TMPRSS11EQ9UL52 423 aa12.8□□□□□ -0.36
CTR9-201ENST00000361367 TDRD15B5MCY1 1934 aaKnown RBP12.8□□□□□ -0.36
CTR9-201ENST00000361367 TTLL8A6PVC2 850 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 DISC1C4P0D8 188 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 P2RX1P51575 399 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 SNU13P55769 128 aaKnown RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 PRKCDQ05655 676 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 COL28A1Q2UY09 1125 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 DHRS4L2Q6PKH6 230 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 ZNF584Q8IVC4 421 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 MINDY2Q8NBR6 621 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NPRL2Q8WTW4 380 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 MED20Q9H944 212 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 LOC102725191A0A1B0GVB3 256 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 OR6C76A6NM76 312 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 GREM1O60565 184 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 CD14P08571 375 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 CRMP1Q14194 572 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 C1orf140Q5VVS0 124 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NIPAL3Q6P499 406 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 B3GLCTQ6Y288 498 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 ZNF554Q86TJ5 538 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 SLC22A16Q86VW1 577 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 GGHQ92820 318 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NXF5Q9H1B4 397 aaKnown RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 INPP5EQ9NRR6 644 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 BABAM2Q9NXR7 383 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 ZNF638Q14966 1978 aaKnown RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 TMEM269A0A1B0GVZ9 245 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 DCDC2BA2VCK2 349 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 RLN2P04090 185 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 BMXP51813 675 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 PCBD1P61457 104 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NFATC3Q12968 1075 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 TMEM244Q5VVB8 128 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NKAIN4Q8IVV8 208 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 NMNAT3Q96T66 252 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 SEMA4GQ9NTN9 838 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 APC2O95996 2303 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 EEF1E1O43324 174 aaKnown RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 ART1P52961 327 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 EMX1Q04741 257 aaPredicted RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 RSU1Q15404 277 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 HRASLS5Q96KN8 279 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 ALG12Q9BV10 488 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 CTSFQ9UBX1 484 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 TBC1D24Q9ULP9 559 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 C14orf166Q9Y224 244 aaKnown RBP12.79□□□□□ -0.36
CTR9-201ENST00000361367 ASXL3Q9C0F0 2248 aa12.79□□□□□ -0.36
CTR9-201ENST00000361367 IFNA21P01568 189 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 GTF2F2P13984 249 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ZNF26P17031 533 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 ENPP1P22413 925 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 MMP11P24347 488 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 GCH1P30793 250 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 BIDP55957 195 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 DUSP8Q13202 625 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 TRA2AQ13595 282 aaKnown RBP eCLIP12.78□□□□□ -0.363e-7■■■■■ 31.7
CTR9-201ENST00000361367 MELKQ14680 651 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 GXYLT1Q4G148 440 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ZNF417Q8TAU3 575 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SLC25A43Q8WUT9 341 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 GATA6Q92908 595 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FAM46BQ96A09 425 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 OR2A5Q96R48 311 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 OR10A2Q9H208 303 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ZNF442Q9H7R0 627 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 ELOVL3Q9HB03 270 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 MBD1Q9UIS9 605 aaPredicted RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 HHLA2Q9UM44 414 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 YARS2Q9Y2Z4 477 aaKnown RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 TPRP12270 2363 aaKnown RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
CTR9-201ENST00000361367 A0A0X1KG70 313 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FAM166BA8MTA8 275 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 PITPNBP48739 271 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FOXK2Q01167 660 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FAM219BQ5XKK7 198 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 PGBD2Q6P3X8 592 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 SLC16A14Q7RTX9 510 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 Q8N402 240 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 OR5J2Q8NH18 312 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 FNDC8Q8TC99 324 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 TAAR9Q96RI9 348 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 BCL2L10Q9HD36 194 aa12.78□□□□□ -0.36
CTR9-201ENST00000361367 NOSIPQ9Y314 301 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms