RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 LRRC28Q86X40 367 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 CMASQ8NFW8 434 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 IER3IP1Q9Y5U9 82 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SCN5AQ14524 2016 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SLC16A5O15375 505 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 GGT1P19440 569 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SLC6A8P48029 635 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 DMWDQ09019 674 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 OR5H6Q8NGV6 325 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 CPNE4Q96A23 557 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SERINC2Q96SA4 455 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 NMES1Q9C002 83 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 OR2J3O76001 311 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 INCA1Q0VD86 236 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 ACSM3Q53FZ2 586 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 C18orf63Q68DL7 685 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SIMC1Q8NDZ2 872 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 OR13C5Q8NGS8 318 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 OR13C2Q8NGS9 318 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SLC35D1Q9NTN3 355 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 TIFABQ6ZNK6 161 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 CMSS1Q9BQ75 279 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 CDK4P11802 303 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 HLCSP50747 726 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 GPR176Q14439 515 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 RASD1Q9Y272 281 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 CDHR4A6H8M9 788 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 KDM4EB2RXH2 506 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 RNGTTO60942 597 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SORDQ00796 357 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 SNTB1Q13884 538 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 INIPQ9NRY2 104 aa16.24■□□□□ 0.19
CACNA1A-201ENST00000360228 ARHGAP23Q9P227 1491 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF816-ZNF321PA0A0X1KG74 233 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 HBQ1P09105 142 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 HNRNPA2B1P22626 353 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 IKZF1Q13422 519 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 Q6ZVL8 140 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 GLB1L2Q8IW92 636 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF321PQ8N8H1 164 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 COQ4Q9Y3A0 265 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 GYPBP06028 91 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 SPP1P10451 314 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 BLOC1S3Q6QNY0 202 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 DCAF4L2Q8NA75 395 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 BARX1Q9HBU1 254 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 GNG12Q9UBI6 72 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 TMEM184BQ9Y519 407 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 NCR1O76036 304 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 NME2P22392 152 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 NDUFAF7Q7L592 441 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 RNF141Q8WVD5 230 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 SEC22CQ9BRL7 303 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF331Q9NQX6 463 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 M0R3H8 397 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 PRAMEF11O60813 436 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 EMP3P54852 163 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 C1orf61Q13536 156 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 KCNRGQ8N5I3 272 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 BOCQ9BWV1 1114 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 RGPD8O14715 1765 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF587BE7ETH6 402 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 TRIB3Q96RU7 358 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 STYXL1Q9Y6J8 313 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF407Q9C0G0 2248 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 GPR39O43194 453 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 EGFP01133 1207 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 TRAPPC2P0DI81 140 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 TRAPPC2BP0DI82 140 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 ZNF728P0DKX0 622 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 NTF3P20783 257 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 PCBD1P61457 104 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 PAFAH1B3Q15102 231 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 RBMS2Q15434 407 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 FAM57BQ71RH2 274 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 LFNGQ8NES3 379 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 RHEBL1Q8TAI7 183 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 OR2M2Q96R28 347 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 FER1L5A0AVI2 2057 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 FGF18O76093 207 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 MMP12P39900 470 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 CDS1Q92903 461 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 LIN7BQ9HAP6 207 aa16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 LYRM2Q9NU23 88 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-201ENST00000360228 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 SHISA6Q6ZSJ9 500 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 C11orf42Q8N5U0 333 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 FRMD1Q8N878 549 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 HSD17B8Q92506 261 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 RAB7BQ96AH8 199 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 MUCL1Q96DR8 90 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 OR7D2Q96RA2 312 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 METTL17Q9H7H0 456 aaPredicted RBP16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 B4GALT6Q9UBX8 382 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 HSD17B6O14756 317 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 MFSD6LQ8IWD5 586 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 ANGPTL6Q8NI99 470 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 CENPOQ9BU64 300 aa16.22■□□□□ 0.19
CACNA1A-201ENST00000360228 PCDHGA9Q9Y5G4 932 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms