RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CD1CP29017 333 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 MNDAP41218 407 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 RPS5P46782 204 aaKnown RBP10.3□□□□□ -0.76
SSU72-202ENST00000359060 PRPS1P60891 318 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 FZD2Q14332 565 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 TAF13Q15543 124 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 HBMQ6B0K9 141 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.3□□□□□ -0.76
SSU72-202ENST00000359060 LSM14AQ8ND56 463 aaKnown RBP10.3□□□□□ -0.76
SSU72-202ENST00000359060 OR10H5Q8NGA6 315 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 OR4M1Q8NGD0 313 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 TSSK2Q96PF2 358 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 FYTTD1Q96QD9 318 aaKnown RBP10.3□□□□□ -0.76
SSU72-202ENST00000359060 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 TMA7Q9Y2S6 64 aaKnown RBP10.3□□□□□ -0.76
SSU72-202ENST00000359060 PLXND1Q9Y4D7 1925 aa10.3□□□□□ -0.76
SSU72-202ENST00000359060 A0A1W2PPC4 97 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 HMX3A6NHT5 357 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 A6NL46 340 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 EIF1AYO14602 144 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 DUX1O43812 170 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 HOXD12P35452 270 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 EEF1A1P68104 462 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 VASH1Q7L8A9 365 aaPredicted RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 KRT77Q7Z794 578 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 LRRC28Q86X40 367 aaPredicted RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 POGLUT1Q8NBL1 392 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ADAMTS18Q8TE60 1221 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ASB12Q8WXK4 309 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ORAI1Q96D31 301 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 LRRC61Q9BV99 259 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 INPP5EQ9NRR6 644 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 RBFOX1Q9NWB1 397 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 UCKL1Q9NWZ5 548 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CLEC1BQ9P126 229 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ZDBF2Q9HCK1 2354 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 FMO6PO60774 539 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CBX7O95931 251 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ADH7P40394 386 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 MAP3K8P41279 467 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 HTR3AP46098 478 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ZNF136P52737 540 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 RAB14P61106 215 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 SIRPAP78324 504 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 SF3A2Q15428 464 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 PRAMEF17Q5VTA0 474 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 GARNL3Q5VVW2 1013 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 OTPQ5XKR4 325 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 NUP54Q7Z3B4 507 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 SLC35B4Q969S0 331 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 PLEKHB1Q9UF11 243 aaPredicted RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 PLXNB3Q9ULL4 1909 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 BPTFQ12830 3046 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 A0A0B4J203 849 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ZNF264O43296 627 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 RPS27P42677 84 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 MTNR1BP49286 362 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ARRB1P49407 418 aaPredicted RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 BTBD16Q32M84 506 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 WBP2NLQ6ICG8 309 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 HEPHL1Q6MZM0 1159 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 PLXDC1Q8IUK5 500 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 UBQLNLQ8IYU4 475 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 BCORP1Q8N888 145 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 OR2T4Q8NH00 348 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 OR5J2Q8NH18 312 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 GPBAR1Q8TDU6 330 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 AKAP1Q92667 903 aaKnown RBP eCLIP10.29□□□□□ -0.76
SSU72-202ENST00000359060 ALG12Q9BV10 488 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CKLFQ9UBR5 152 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 E9PI62 339 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 FZD7O75084 574 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CD2P06729 351 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CTSBP07858 339 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 TACR3P29371 465 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 CCKBRP32239 447 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 GNALP38405 381 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 PYHIN1Q6K0P9 492 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 WDR88Q6ZMY6 472 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ESPNLQ6ZVH7 1005 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 TSLPQ969D9 159 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 S100A16Q96FQ6 103 aaKnown RBP10.29□□□□□ -0.76
SSU72-202ENST00000359060 FUZQ9BT04 418 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 ISYNA1Q9NPH2 558 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 TAS2R10Q9NYW0 307 aa10.29□□□□□ -0.76
SSU72-202ENST00000359060 RP1P56715 2156 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 CYR61O00622 381 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 NKX2-2O95096 273 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 ZIC2O95409 532 aaPredicted RBP10.28□□□□□ -0.76
SSU72-202ENST00000359060 PNMTP11086 282 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 MYF5P13349 255 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 STOMP27105 288 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 DNASE1L1P49184 302 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 EVX1P49640 407 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 OR1D5P58170 312 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 IL17RDQ8NFM7 739 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 BEST4Q8NFU0 473 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 HOXD1Q9GZZ0 328 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 KLRF1Q9NZS2 232 aa10.28□□□□□ -0.76
SSU72-202ENST00000359060 KLF15Q9UIH9 416 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms