RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PPM1DO15297 605 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SLC2A10O95528 541 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF14P17017 642 aaPredicted RBP6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SSR4P51571 173 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 OR6V1Q8N148 313 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 OR14K1Q8NGZ2 314 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MRI1Q9BV20 369 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 KATNB1Q9BVA0 655 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SGPP1Q9BX95 441 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 OR52D1Q9H346 318 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 EPHX3Q9H6B9 360 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 MYOTQ9UBF9 498 aa6.83□□□□□ -1.32
VPS13A-202ENST00000357409 SMLR1H3BR10 107 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 UTS2O95399 124 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 IFNA7P01567 189 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 IL1AP01583 271 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SNRPBP14678 240 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 BAXQ07812 192 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 HTR3DQ70Z44 454 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 APLFQ8IW19 511 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 RDH10Q8IZV5 341 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 METTL4Q8N3J2 472 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 MIB2Q96AX9 1013 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 FYTTD1Q96QD9 318 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 OR10A5Q9H207 317 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PPA2Q9H2U2 334 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 FGF22Q9HCT0 170 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 THSD1Q9NS62 852 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SLC5A6Q9Y289 635 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 B8ZZF3 427 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 OR2F2O95006 317 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 NDUFB2O95178 105 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 AIFM1O95831 613 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PATE4P0C8F1 98 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GABRA4P48169 554 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 CDC34P49427 236 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 ART1P52961 327 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 ARHGAP11BQ3KRB8 267 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 B3GNTL1Q67FW5 361 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 OR51H1Q8NH63 302 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 FAM173AQ9BQD7 235 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 B4DXG7 233 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 FANCGO15287 622 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 CXCL13O43927 109 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SBK2P0C263 348 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PI3P19957 117 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 CD1CP29017 333 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 RAB11BQ15907 218 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 MEP1BQ16820 701 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 AADACL3Q5VUY0 350 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 TAAR8Q969N4 342 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 LRFN5Q96NI6 719 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GNRHR2Q96P88 292 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SHARPINQ9H0F6 387 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 M0R233 179 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SLC22A5O76082 557 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 DNASE1P24855 282 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 YBX1P67809 324 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GABREP78334 506 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GPLD1P80108 840 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GPR50Q13585 617 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 UGT2A3Q6UWM9 527 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 UMODL1-AS1Q8N2C9 162 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 HAVCR2Q8TDQ0 301 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 IGSF5Q9NSI5 407 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PAK1IP1Q9NWT1 392 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 ATG4BQ9Y4P1 393 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 NPTNQ9Y639 398 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 A0A1B0GTW7 788 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 C5orf49A4QMS7 147 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 RAB3AP20336 220 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SERPINF1P36955 418 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 CCR2P41597 374 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 RHEBQ15382 184 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SPINK9Q5DT21 86 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 RNFT1Q5M7Z0 435 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 WIPI1Q5MNZ9 446 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 OR8G2PQ6IF36 304 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 TMEM205Q6UW68 189 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 ZNF662Q6ZS27 426 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SYT9Q86SS6 491 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SNX18Q96RF0 628 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 TIMMDC1Q9NPL8 285 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 KIF25Q9UIL4 384 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 FITM1A5D6W6 292 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 H0YJX3 145 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 GLSO94925 669 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 LY86O95711 162 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SNRNP70P08621 437 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 S100PP25815 95 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PTGS2P35354 604 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 SRP14P37108 136 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 ILF2Q12905 390 aaKnown RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 AKR1C8PQ5T2L2 129 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 YOD1Q5VVQ6 348 aaPredicted RBP6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PDSS2Q86YH6 399 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 OR5D14Q8NGL3 314 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 C20orf24Q9BUV8 137 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 LHPPQ9H008 270 aa6.82□□□□□ -1.32
VPS13A-202ENST00000357409 PAQR5Q9NXK6 330 aaPredicted RBP6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms