RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 ACTL6BO94805 426 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NUDT7P0C024 238 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 UBBP0CG47 229 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 UBCP0CG48 685 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PRKACBP22694 351 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 EFNA3P52797 238 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 RPS27AP62979 156 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 UBA52P62987 128 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SIRPAP78324 504 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 ADARB1P78563 741 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 RBMS2Q15434 407 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NKPD1Q17RQ9 610 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 WDR88Q6ZMY6 472 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 OR6F1Q8NGZ6 308 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 ELOVL3Q9HB03 270 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NRIP3Q9NQ35 241 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PRSS16Q9NQE7 514 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 MAN2C1Q9NTJ4 1040 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SIDT1Q9NXL6 827 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 POU2F3Q9UKI9 436 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FBXO7Q9Y3I1 522 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 KNTC1P50748 2209 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 A0A0D9SG52 128 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LOC102723532A0A0G2JNH3 316 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 F8W036 122 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 H3BNC9 293 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TUBG1P23258 451 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 GCH1P30793 250 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SLC6A11P48066 632 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 VASPP50552 380 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 RPL23AP62750 156 aaKnown RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TATDN3Q17R31 274 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SLC48A1Q6P1K1 146 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 DPY19L2P2Q6ZN68 376 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 RFPL4BQ6ZWI9 263 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SULF2Q8IWU5 870 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LKAAEAR1Q8TD35 194 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 WBP2Q969T9 261 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 S100PBPQ96BU1 408 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 C1GALT1Q9NS00 363 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SEMA4GQ9NTN9 838 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 VDAC3Q9Y277 283 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NPFFR2Q9Y5X5 522 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TUBGCP6Q96RT7 1819 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NPIPA5A0A0B4J1W7 369 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TRDV1A0A1B0GX56 115 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NPIPA7E9PJI5 369 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SULT1B1O43704 296 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PEX14O75381 377 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 CER1O95813 267 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 KNG1P01042 644 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LPLP06858 475 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FBXO45P0C2W1 286 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 NPIPA8P0DM63 369 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PIPP12273 146 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 BMP4P12644 408 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PSMB5P28074 263 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 PSMB10P40306 273 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 FAM78AQ5JUQ0 283 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LACC1Q8IV20 430 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 OR4F15Q8NGB8 312 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 OR4M1Q8NGD0 313 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 OR56B1Q8NGI3 324 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 TM4SF18Q96CE8 201 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 AMDHD1Q96NU7 426 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 SLC25A18Q9H1K4 315 aa10.93□□□□□ -0.66
COL9A1-202ENST00000357250 BOKQ9UMX3 212 aaPredicted RBP10.93□□□□□ -0.66
COL9A1-202ENST00000357250 LOC105369274A0A096LPK9 316 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 TVP23AA6NH52 213 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 DPM1O60762 260 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GIFP27352 417 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CAV2P51636 162 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 FGL2Q14314 439 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 DEFB133Q30KQ1 61 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 AGAP7PQ5VUJ5 663 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 KDM4DQ6B0I6 523 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 OR4N4Q8N0Y3 316 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 GCDHQ92947 438 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 TOMM40LQ969M1 308 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 RAB39BQ96DA2 213 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ZNF582Q96NG8 517 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 LRFN5Q96NI6 719 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 STACQ99469 402 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ENKD1Q9H0I2 346 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 LRIT1Q9P2V4 623 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 REV1Q9UBZ9 1251 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 PTRH2Q9Y3E5 179 aaKnown RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 WIF1Q9Y5W5 379 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CXorf51AA0A1B0GTR3 108 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 A6NJ64 397 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 CTDSP2O14595 271 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 DVL2O14641 736 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 HOXC11O43248 304 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 NFYAP23511 347 aaPredicted RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 ELAVL4P26378 380 aaKnown RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 FKBP2P26885 142 aaKnown RBP10.92□□□□□ -0.66
COL9A1-202ENST00000357250 AQP2P41181 271 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 KIAA1024LP59773 190 aa10.92□□□□□ -0.66
COL9A1-202ENST00000357250 SNRPD2P62316 118 aaKnown RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms