RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 A0A1B0GV90 55 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 POM121BA6NF01 834 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 G3V3Q6 166 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SNAPC5O75971 98 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PAPLNO95428 1278 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 EFEMP2O95967 443 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRNPP04156 253 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 WNT1P04628 370 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RPN2P04844 631 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CRYBA1P05813 215 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PTHLHP12272 177 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 DRD2P14416 443 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NPR2P20594 1047 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 HIST1H1TP22492 207 aaPredicted RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 ATP5A1P25705 553 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CALCRP30988 508 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 BCL6P41182 706 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 WASP42768 502 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RIDAP52758 137 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 CLDN12P56749 244 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 BTN3A2P78410 334 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 RBMS2Q15434 407 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PLPP4Q5VZY2 271 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 MEPCEQ7L2J0 689 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 NRSN1Q8IZ57 195 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 WDSUB1Q8N9V3 476 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 TMIEQ8NEW7 156 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR13C2Q8NGS9 318 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR5J2Q8NH18 312 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 PHOSPHO1Q8TCT1 267 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 BCL2L10Q9HD36 194 aa7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 MRPS30Q9NP92 439 aaKnown RBP7.62□□□□□ -1.19
CDC42SE1-201ENST00000357235 SCN5AQ14524 2016 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ALPK2Q86TB3 2170 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF106Q9H2Y7 1883 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 TRBV23OR9-2A0A075B6M9 112 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 A0A0A6YYD5 115 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 C17orf113A0A1B0GUU1 675 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 CDHR4A6H8M9 788 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM86C2PA6NEL3 165 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 MID1O15344 667 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SPINT1O43278 529 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 IGHA1P01876 353 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 TFP02787 698 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RD3LP0DJH9 198 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SPI1P17947 270 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FRKP42685 505 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 NUBP1P53384 320 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 REEP5Q00765 189 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 OC90Q02509 493 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FZD5Q13467 585 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 HLXQ14774 488 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GSG1Q2KHT4 349 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RNF212Q495C1 297 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 C9orf152Q5JTZ5 239 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 B3GNTL1Q67FW5 361 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 NIPAL3Q6P499 406 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 MBOAT2Q6ZWT7 520 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 CBLN2Q8IUK8 224 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RAB42Q8N4Z0 105 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RFLNBQ8N5W9 214 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 OR56A1Q8NGH5 318 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZCCHC10Q8TBK6 192 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF296Q8WUU4 475 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZMYND19Q96E35 227 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 TOX2Q96NM4 488 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM83CQ9BQN1 747 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF649Q9BS31 505 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 AICDAQ9GZX7 198 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FN3KQ9H479 309 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 EPHX3Q9H6B9 360 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SIDT1Q9NXL6 827 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RCE1Q9Y256 329 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 HEATR5BQ9P2D3 2071 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 CHD7Q9P2D1 2997 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 IGKV1-8A0A0C4DH67 115 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 PLSCR5A0PG75 271 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 IGLON5A6NGN9 336 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 UNC119BA6NIH7 251 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 PRRT4C9JH25 899 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GPR37O15354 613 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 EMC8O43402 210 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZIC2O95409 532 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 RHOP08100 348 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZGLP1P0C6A0 271 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ATF1P18846 271 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 MAKP20794 623 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GRPRP30550 384 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 MAGEB1P43366 347 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 POU3F4P49335 361 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ALKBH1Q13686 389 aaKnown RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GK2Q14410 553 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SMCO1Q147U7 214 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 SLC36A2Q495M3 483 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 ZNF658BQ4V348 819 aaPredicted RBP7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 FAM111BQ6SJ93 734 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 PGAP1Q75T13 922 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GID4Q8IVV7 300 aa7.61□□□□□ -1.19
CDC42SE1-201ENST00000357235 GJD3Q8N144 294 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms