RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 SMPDL3BQ92485 455 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 C11orf54Q9H0W9 315 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 USP54Q70EL1 1684 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM164Q5U3C3 297 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 FBXO27Q8NI29 283 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 THEM6Q8WUY1 208 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 NMNAT2Q9BZQ4 307 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF391Q9UJN7 358 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 RPS10-NUDT3A0A1W2PQS6 291 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 K7EQM0 130 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 ITGB7P26010 798 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 RPS10P46783 165 aaKnown RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 ARRB1P49407 418 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 CLCNKAP51800 687 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 HTRA4P83105 476 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 RNASE12Q5GAN4 147 aaKnown RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 CACUL1Q86Y37 369 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 MITD1Q8WV92 249 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 SMIM19Q96E16 107 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 NKX6-2Q9C056 277 aaPredicted RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 NTN4Q9HB63 628 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 EMCNQ9ULC0 261 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 PADI3Q9ULW8 664 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 HES2Q9Y543 173 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 KDM4FA0A1W2PPD8 638 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 HPNP05981 417 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 GNSP15586 552 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 CD52P31358 61 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 CDK5Q00535 292 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 NOGQ13253 232 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 TNK1Q13470 666 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 LYRM7Q5U5X0 104 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 MDGA2Q7Z553 956 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 OR6N2Q8NGY6 317 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 OR8S1Q8NH09 359 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 WRAP53Q9BUR4 548 aaKnown RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 PAPOLGQ9BWT3 736 aaKnown RBP6.15□□□□□ -1.43
VPS13B-202ENST00000357162 ACPTQ9BZG2 426 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 CEP295Q9C0D2 2601 aa6.15□□□□□ -1.43
VPS13B-202ENST00000357162 STMND1H3BQB6 276 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 HIST1H1TP22492 207 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ARL3P36405 182 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 GABRA2P47869 451 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 CDKN2DP55273 166 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 COTL1Q14019 142 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 SURF2Q15527 256 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-202ENST00000357162 RTL8BQ17RB0 113 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 NADSYN1Q6IA69 706 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PLPP6Q8IY26 295 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 OR9A2Q8NGT5 310 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 YIPF5Q969M3 257 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ACOD1A6NK06 481 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 FADS1O60427 444 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 RPS24P62847 133 aaKnown RBP6.14□□□□□ -1.43
VPS13B-202ENST00000357162 HTR4Q13639 388 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ADPRMQ3LIE5 342 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 CGB2Q6NT52 195 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 LETMD1Q6P1Q0 360 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF619Q8N2I2 560 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 NHLRC2Q8NBF2 726 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 OR6K3Q8NGY3 331 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM19Q96HH6 336 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 SMOQ99835 787 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TOLLIPQ9H0E2 274 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF442Q9H7R0 627 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TAS2R16Q9NYV7 291 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TRAV18A0A075B6X5 111 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 IQCF5A8MTL0 148 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 SDC1P18827 310 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 FCN2Q15485 313 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 INPP5KQ9BT40 448 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 NIT2Q9NQR4 276 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 KLRF1Q9NZS2 232 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 SLC23A1Q9UHI7 598 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PIEZO2Q9H5I5 2752 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 DVL2O14641 736 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 THBS1P07996 1170 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 KITLGP21583 273 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 BCKDHBP21953 392 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 GNRHRP30968 328 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 DHPSP49366 369 aaPredicted RBP6.14□□□□□ -1.43
VPS13B-202ENST00000357162 SLC25A30Q5SVS4 291 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TANGO2Q6ICL3 276 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 OR4C11Q6IEV9 310 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ARHGEF39Q8N4T4 335 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PLEKHJ1Q9NW61 149 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ASH2LQ9UBL3 628 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 CTDSP2O14595 271 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PQBP1O60828 265 aaKnown RBP6.14□□□□□ -1.43
VPS13B-202ENST00000357162 AOAHP28039 575 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PSMB3P49720 205 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 FCRL6Q6DN72 434 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 BRICD5Q6PL45 260 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 APOOLQ6UXV4 268 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 PRICKLE2Q7Z3G6 844 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF695Q8IW36 515 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 UEVLDQ8IX04 471 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 GCNT2Q8N0V5 402 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 TMEM156Q8N614 296 aa6.14□□□□□ -1.43
VPS13B-202ENST00000357162 MOCOSQ96EN8 888 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms