RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 OR4N2Q8NGD1 307 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 FAM46BQ96A09 425 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 SLC6A7Q99884 636 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 OR11A1Q9GZK7 315 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ZNF442Q9H7R0 627 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 SYNPO2LQ9H987 977 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 DUSP22Q9NRW4 184 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 TMEM221A6NGB7 291 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 M0R296 226 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ZNF432O94892 652 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 AKR7A3O95154 331 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 IGHEP01854 428 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 Q8N402 240 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 SPTSSAQ969W0 71 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 CXorf51AA0A1B0GTR3 108 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 DSCR3O14972 297 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 NUDT21O43809 227 aaKnown RBP12.65□□□□□ -0.38
SMC6-201ENST00000351948 ICOSLGO75144 302 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 TPOP07202 933 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 MMP11P24347 488 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 SLC14A1Q13336 389 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ZNF565Q8N9K5 539 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ZNF578Q96N58 590 aaPredicted RBP12.65□□□□□ -0.38
SMC6-201ENST00000351948 TUBA1CQ9BQE3 449 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 KLHL9Q9P2J3 617 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 FXYD1O00168 92 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ZNF12P17014 697 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 CRHBPP24387 322 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 NXPH1P58417 271 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 NFATC3Q12968 1075 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 AAED1Q7RTV5 226 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 CPEB2Q7Z5Q1 589 aaKnown RBP12.65□□□□□ -0.38
SMC6-201ENST00000351948 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 UCN3Q969E3 161 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 ELOVL3Q9HB03 270 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 FAM60AQ9NP50 221 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 FAM86C1Q9NVL1 165 aa12.65□□□□□ -0.38
SMC6-201ENST00000351948 CHRNB1P11230 501 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 OTPQ5XKR4 325 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 VHLLQ6RSH7 139 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 LANCL3Q6ZV70 420 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 SLC25A44Q96H78 314 aaPredicted RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 DPAGT1Q9H3H5 408 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 C12orf49Q9H741 205 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 NOP16Q9Y3C1 178 aaKnown RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 MYOFQ9NZM1 2061 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 IGHV1OR21-1A0A087WYE8 117 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 TMEM269A0A1B0GVZ9 245 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 FAM230AA0A1W2PPH8 454 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 LILRA5A6NI73 299 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 PHYHO14832 338 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 CDK1P06493 297 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 NID1P14543 1247 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 Q96M85 177 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 KCNE3Q9Y6H6 103 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 SRCAPQ6ZRS2 3230 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 A0A1W2PNR3 127 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 TEAD1P28347 426 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 APLNRP35414 380 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 CARD18P57730 90 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 RAB40BQ12829 278 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 ZNF554Q86TJ5 538 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 FCAMRQ8WWV6 532 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 ZNF566Q969W8 418 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 COX14Q96I36 57 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 DEFB127Q9H1M4 99 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 FTCDNL1E5RQL4 147 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 H0YIG0 161 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 BCAS1O75363 584 aaPredicted RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 ITGAMP11215 1152 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 GLP1RP43220 463 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 FASLGP48023 281 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 EIF4EBP2Q13542 120 aaPredicted RBP12.64□□□□□ -0.39
SMC6-201ENST00000351948 RSU1Q15404 277 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 TRAM1Q15629 374 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 EXT1Q16394 746 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 THRSPQ92748 146 aa12.64□□□□□ -0.39
SMC6-201ENST00000351948 HTR3BO95264 441 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 ATXN7L3Q14CW9 347 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 ACSM3Q53FZ2 586 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 FAM205BPQ63HN1 556 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 TCTN3Q6NUS6 607 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 RPL3LQ92901 407 aaKnown RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 RFT1Q96AA3 541 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 LRRC46Q96FV0 321 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 GSKIPQ9P0R6 139 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 LUZP4Q9P127 313 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 PARP14Q460N5 1801 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 RP1P56715 2156 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 GREB1LQ9C091 1923 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 A0A1W2PQL4 384 aaPredicted RBP12.63□□□□□ -0.39
SMC6-201ENST00000351948 UCHL1P09936 223 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 NPR2P20594 1047 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 CAV3P56539 151 aa12.63□□□□□ -0.39
SMC6-201ENST00000351948 HERV-K104P61576 105 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms