RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 TSPYL5Q86VY4 417 aaPredicted RBP12.48□□□□□ -0.41
SEC13-202ENST00000350697 NAXEQ8NCW5 288 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 SDCCAG3Q96C92 435 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 CCDC124Q96CT7 223 aaKnown RBP12.48□□□□□ -0.41
SEC13-202ENST00000350697 ASB9Q96DX5 294 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 MPP4Q96JB8 637 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 AMBRA1Q9C0C7 1298 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 DOPEY2Q9Y3R5 2298 aa12.48□□□□□ -0.41
SEC13-202ENST00000350697 AQP8O94778 261 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 PRKD3O94806 890 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 OR5F1O95221 314 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 AHSA1O95433 338 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 STAMBPO95630 424 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 THY1P04216 161 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 CRHP06850 196 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 RNF224P0DH78 156 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 TMIGD3P0DMS9 266 aaPredicted RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 IMPDH2P12268 514 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 ATP6V1B2P21281 511 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 ENPP1P22413 925 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 IFNA8P32881 189 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 MS4A2Q01362 244 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 EGR4Q05215 589 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 PIN1Q13526 163 aaPredicted RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 SNCBQ16143 134 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 LCN8Q6JVE9 175 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 PGM2L1Q6PCE3 622 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 CYP2R1Q6VVX0 501 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 FCRLAQ7L513 359 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 CCDC71Q8IV32 467 aaPredicted RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 STMN2Q93045 179 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 UTP4Q969X6 686 aaKnown RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 INTS12Q96CB8 462 aaKnown RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 ZHX1-C8orf76Q96EF9 292 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 SLC41A3Q96GZ6 507 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 PYURFQ96I23 114 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 PRRC1Q96M27 445 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 ZNF629Q9UEG4 869 aaPredicted RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 SLC7A7Q9UM01 511 aa12.47□□□□□ -0.41
SEC13-202ENST00000350697 USP9YO00507 2555 aaPredicted RBP12.47□□□□□ -0.41
SEC13-202ENST00000350697 IGKV1D-42A0A075B6H8 117 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 LIPT2A6NK58 231 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 EIF1BO60739 113 aaKnown RBP12.46□□□□□ -0.41
SEC13-202ENST00000350697 LYPD3O95274 346 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 GPIP06744 558 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 THRBP10828 461 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 CTSSP25774 331 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 AGFG1P52594 562 aaKnown RBP12.46□□□□□ -0.41
SEC13-202ENST00000350697 OR2B6P58173 313 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 SLC35A1P78382 337 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 TRAP1Q12931 704 aaKnown RBP12.46□□□□□ -0.41
SEC13-202ENST00000350697 RNPS1Q15287 305 aaKnown RBP12.46□□□□□ -0.41
SEC13-202ENST00000350697 GTF2IRD2BQ6EKJ0 949 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 LINC00114Q6XXX2 140 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 GDF7Q7Z4P5 450 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 GTF2IRD2Q86UP8 949 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 LSRQ86X29 649 aaPredicted RBP12.46□□□□□ -0.41
SEC13-202ENST00000350697 MCEMP1Q8IX19 187 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 GCNT2Q8N0V5 402 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 SLC43A2Q8N370 569 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 FAM86B1Q8N7N1 296 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 RNF128Q8TEB7 428 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 DNAJA3Q96EY1 480 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 EPYCQ99645 322 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 TMEM43Q9BTV4 400 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 SFXN3Q9BWM7 321 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 TAPBPLQ9BX59 468 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 RIMS3Q9UJD0 308 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 A4GNTQ9UNA3 340 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 ENPP4Q9Y6X5 453 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 V9GYQ6 96 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 CACNA1CQ13936 2221 aa12.46□□□□□ -0.41
SEC13-202ENST00000350697 TRAV36DV7A0A075B6V5 113 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 IGHV3-15A0A0B4J1V0 119 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 DVL2O14641 736 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 ACOT8O14734 319 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 SMAD9O15198 467 aaKnown RBP12.45□□□□□ -0.42
SEC13-202ENST00000350697 OR2T1O43869 369 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 IL18BPO95998 194 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 PLGP00747 810 aaPredicted RBP12.45□□□□□ -0.42
SEC13-202ENST00000350697 FPR1P21462 350 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 OPRM1P35372 400 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 ST3GAL3Q11203 375 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 FOXF2Q12947 444 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 OR7A5Q15622 319 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 FAM69AQ5T7M9 428 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 FBXW10Q5XX13 1052 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 CYP4Z1Q86W10 505 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 LILRB4Q8NHJ6 448 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 MFSD8Q8NHS3 518 aa12.45□□□□□ -0.42
SEC13-202ENST00000350697 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
SEC13-202ENST00000350697 KTI12Q96EK9 354 aaPredicted RBP12.45□□□□□ -0.42
SEC13-202ENST00000350697 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
SEC13-202ENST00000350697 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms