RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 ATP6V1C2Q8NEY4 427 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 LIPHQ8WWY8 451 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 TMEM185BQ9H7F4 350 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 PAPOLBQ9NRJ5 636 aaKnown RBP24.39■■□□□ 1.5
SSBP4-202ENST00000348495 REV1Q9UBZ9 1251 aa24.39■■□□□ 1.5
SSBP4-202ENST00000348495 PIEZO2Q9H5I5 2752 aa24.39■■□□□ 1.49
SSBP4-202ENST00000348495 H3BML4 177 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 RPS5P46782 204 aaKnown RBP24.38■■□□□ 1.49
SSBP4-202ENST00000348495 LTBQ06643 244 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 IZUMO2Q6UXV1 221 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 OR6S1Q8NH40 331 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 UCK2Q9BZX2 261 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 SLC6A15Q9H2J7 730 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 LRRN3E7EW58 273 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 TFECO14948 347 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-202ENST00000348495 CH25HO95992 272 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 GSTM3P21266 225 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 CMPK2Q5EBM0 449 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 GALNT5Q7Z7M9 940 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 SIAH3Q8IW03 269 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 RDH12Q96NR8 316 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 MOGAT1Q96PD6 335 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 SMPD3Q9NY59 655 aaPredicted RBP24.38■■□□□ 1.49
SSBP4-202ENST00000348495 SLC6A5Q9Y345 797 aa24.38■■□□□ 1.49
SSBP4-202ENST00000348495 EFCAB9A8MZ26 197 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 FZD7O75084 574 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 OR7A10O76100 309 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 BGLAPP02818 100 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 TP53P04637 393 aaPredicted RBP24.37■■□□□ 1.49
SSBP4-202ENST00000348495 FAM69AQ5T7M9 428 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 Q8NA96 180 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 DEFB127Q9H1M4 99 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 LIPGQ9Y5X9 500 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 AP4B1Q9Y6B7 739 aa24.37■■□□□ 1.49
SSBP4-202ENST00000348495 FTCDNL1E5RQL4 147 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 AHSA1O95433 338 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 SNAP29O95721 258 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 IGHG3P01860 377 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 TFPIP10646 304 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 FUT1P19526 365 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 RAD23AP54725 363 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 MYBPHQ13203 477 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 FHL1Q13642 323 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 RFX4Q33E94 735 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 TMEM176BQ3YBM2 270 aaPredicted RBP24.36■■□□□ 1.49
SSBP4-202ENST00000348495 TRILQ7L0X0 811 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 LRRC17Q8N6Y2 441 aa24.36■■□□□ 1.49
SSBP4-202ENST00000348495 OR2T1O43869 369 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 MT-ATP6P00846 226 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 OPN1LWP04000 364 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 IMPDH2P12268 514 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 SFTPDP35247 375 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 ALDH6A1Q02252 535 aaKnown RBP24.35■■□□□ 1.49
SSBP4-202ENST00000348495 C19orf57Q0VDD7 668 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 RASSF6Q6ZTQ3 369 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 MFSD8Q8NHS3 518 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 NEIL3Q8TAT5 605 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 MBOAT4Q96T53 435 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 TACO1Q9BSH4 297 aaKnown RBP24.35■■□□□ 1.49
SSBP4-202ENST00000348495 GABARAPL3Q9BY60 117 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 FKRPQ9H9S5 495 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 LUZP4Q9P127 313 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 HDGFL3Q9Y3E1 203 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 ORC6Q9Y5N6 252 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 ITPR1Q14643 2758 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 BOD1L1Q8NFC6 3051 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 UNC119BA6NIH7 251 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 ASAH2BP0C7U1 165 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 SAGP10523 405 aaPredicted RBP24.35■■□□□ 1.49
SSBP4-202ENST00000348495 NHSL2Q5HYW2 709 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 GGNQ86UU5 652 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 KIF18BQ86Y91 864 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 OR13C2Q8NGS9 318 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 RELTQ969Z4 430 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 DNAJA3Q96EY1 480 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 CNTNAP3BQ96NU0 1288 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 CNTNAP3Q9BZ76 1288 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 TOR3AQ9H497 397 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 ZNF229Q9UJW7 825 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 SIGLEC7Q9Y286 467 aa24.35■■□□□ 1.49
SSBP4-202ENST00000348495 LIPT2A6NK58 231 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 GJE1A6NN92 205 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 OSMP13725 252 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 IDUAP35475 653 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 SLC9A3P48764 834 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 LHX2P50458 406 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 IL1RL1Q01638 556 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 C10orf53Q8N6V4 93 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 KLHL15Q96M94 604 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 OR5B2Q96R09 309 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 NANSQ9NR45 359 aa24.34■■□□□ 1.49
SSBP4-202ENST00000348495 TLN1Q9Y490 2541 aaKnown RBP24.33■■□□□ 1.49
SSBP4-202ENST00000348495 HCN1O60741 890 aa24.33■■□□□ 1.49
SSBP4-202ENST00000348495 PTP4A3O75365 173 aa24.33■■□□□ 1.49
SSBP4-202ENST00000348495 POU3F2P20265 443 aaPredicted RBP24.33■■□□□ 1.49
SSBP4-202ENST00000348495 POLR2IP36954 125 aaKnown RBP24.33■■□□□ 1.49
SSBP4-202ENST00000348495 STARP49675 285 aa24.33■■□□□ 1.49
SSBP4-202ENST00000348495 CLDN20P56880 219 aa24.33■■□□□ 1.49
SSBP4-202ENST00000348495 FXYD6P3P58550 94 aa24.33■■□□□ 1.49
SSBP4-202ENST00000348495 CTU2Q2VPK5 515 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms