RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 CXorf58Q96LI9 332 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 HS6ST2Q96MM7 605 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 LRFN5Q96NI6 719 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 OR7D2Q96RA2 312 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 CD180Q99467 661 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 DPH7Q9BTV6 452 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 OR52D1Q9H346 318 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 NKIRAS2Q9NYR9 191 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 RCE1Q9Y256 329 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 KCNK7Q9Y2U2 307 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 OR1A2Q9Y585 309 aa14.64□□□□□ -0.07
HMGA1-202ENST00000347617 DUXAA6NLW8 204 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 BHLHE40O14503 412 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 GPRIN2O60269 458 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 ADRB1P08588 477 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 SLC35G4P0C7Q5 338 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 FAUP35544 74 aaKnown RBP14.63□□□□□ -0.07
HMGA1-202ENST00000347617 AHRP35869 848 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 E2F1Q01094 437 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 IL10RAQ13651 578 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 LASP1Q14847 261 aaKnown RBP14.63□□□□□ -0.07
HMGA1-202ENST00000347617 FAM27D1Q5T7N8 215 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 GSG1LQ6UXU4 331 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 TMEM92Q6UXU6 159 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 LINGO2Q7L985 606 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 COQ8AQ8NI60 647 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 THAP4Q8WY91 577 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 C4orf36Q96KX1 117 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 TEAD3Q99594 435 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 CHIAQ9BZP6 476 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 OR10A4Q9H209 315 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 NRIP3Q9NQ35 241 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 ST6GALNAC2Q9UJ37 374 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 SLC35A3Q9Y2D2 325 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 REV3LO60673 3130 aa14.63□□□□□ -0.07
HMGA1-202ENST00000347617 RIIAD1A6NNX1 92 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CHURC1-FNTBB4DL54 471 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 J3QLW9 94 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 TNFRSF10CO14798 259 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SDC3O75056 442 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 KHDRBS3O75525 346 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 NDUFB6O95139 128 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 APBB3O95704 486 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF19P17023 458 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CBX5P45973 191 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 MAZP56270 477 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 YPEL5P62699 121 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 RNASE12Q5GAN4 147 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 C6orf132Q5T0Z8 1188 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SFRP4Q6FHJ7 346 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SLC25A25Q6KCM7 469 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 LRFN4Q6PJG9 635 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 RAB42Q8N4Z0 105 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 GHSRQ92847 366 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 MARC2Q969Z3 335 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SMIM19Q96E16 107 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SLC6A17Q9H1V8 727 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 EVA1AQ9H8M9 152 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 POLMQ9NP87 494 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 C14orf105Q9NVL8 296 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 USP36Q9P275 1121 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 C5AR2Q9P296 337 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF69Q9UC07 566 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZMIZ1Q9ULJ6 1067 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 HS3ST3A1Q9Y663 406 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CDHR4A6H8M9 788 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 E9PI62 339 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ACOT7O00154 380 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 GMDSO60547 372 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SELENOFO60613 162 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 UBBP0CG47 229 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 UBCP0CG48 685 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CSNK2A2P19784 350 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 MAOBP27338 520 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 TRHRP34981 398 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SSR2P43308 183 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 HOXA1P49639 335 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 RPS27AP62979 156 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 UBA52P62987 128 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF85Q03923 595 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ETFDHQ16134 617 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 UNQ9370/PRO34162Q6UXP9 181 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 RANBP3LQ86VV4 465 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 TMEM17Q86X19 198 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 VRK2Q86Y07 508 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CCDC36Q8IYA8 594 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CDK20Q8IZL9 346 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CMTM4Q8IZR5 234 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZNF454Q8N9F8 522 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 OR6K3Q8NGY3 331 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 LILRB1Q8NHL6 650 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 LGALS14Q8TCE9 139 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 SMAP2Q8WU79 429 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 CNOT9Q92600 299 aaKnown RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 TBX5Q99593 518 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 RAB11FIP5Q9BXF6 653 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 AUNIPQ9H7T9 357 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 IFT22Q9H7X7 185 aa14.62□□□□□ -0.07
HMGA1-202ENST00000347617 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.62□□□□□ -0.07
HMGA1-202ENST00000347617 PRKAB1Q9Y478 270 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms