RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 SLC35F1Q5T1Q4 408 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 UBE2UQ5VVX9 321 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 JMJD6Q6NYC1 403 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 CXXC5Q7LFL8 322 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 OR2M3Q8NG83 312 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 PAQR8Q8TEZ7 354 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 TAAR8Q969N4 342 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 CRELD1Q96HD1 420 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 MOGAT1Q96PD6 335 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ANGPTL4Q9BY76 406 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 NDEL1Q9GZM8 345 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 SH2D2AQ9NP31 389 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 HINT3Q9NQE9 182 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 PTPRBP23467 1997 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 CPAMD8Q8IZJ3 1885 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 KNTC1P50748 2209 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 FAM47E-STBD1D6RA91 191 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ETV2O00321 342 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 NPIPB7O75200 414 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 MT-ATP6P00846 226 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 IFNGP01579 166 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 HIST1H2ABP04908 130 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 NOS3P29474 1203 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 RPL4P36578 427 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 RPS5P46782 204 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 GP2P55259 537 aaKnown RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 CDH11P55287 796 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 LTBQ06643 244 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 SLC25A53Q5H9E4 307 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 SYT6Q5T7P8 510 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 SLC22A10Q63ZE4 541 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ARSKQ6UWY0 536 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 HIST3H2AQ7L7L0 130 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ASCL5Q7RTU5 278 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 DTX1Q86Y01 620 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 GID4Q8IVV7 300 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ZNF420Q8TAQ5 688 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ADAMTS14Q8WXS8 1223 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 HIST1H2ACQ93077 130 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 KIAA1143Q96AT1 154 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 SGCZQ96LD1 299 aa19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 ERMAPQ96PL5 475 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 GPX7Q96SL4 187 aaPredicted RBP19.47■□□□□ 0.71
TSPAN3-202ENST00000346495 MCIDASD6RGH6 385 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 ZNF701M0R085 212 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 BGLAPP02818 100 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 ZNF3P17036 446 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 DCKP27707 260 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 ST13P50502 369 aaKnown RBP19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 PRAMEF20Q5VT98 475 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 GPR107Q5VW38 600 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 IGF2-ASQ6U949 168 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 CPOQ8IVL8 374 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 SIRT6Q8N6T7 355 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 FADS6Q8N9I5 356 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 OR4K17Q8NGC6 315 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 MRGPRX4Q96LA9 322 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 PTGES2Q9H7Z7 377 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 GPN2Q9H9Y4 310 aaPredicted RBP19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 CHRNA9Q9UGM1 479 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 IL17BQ9UHF5 180 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 KLHL21Q9UJP4 597 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 VDAC3Q9Y277 283 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 SLC6A5Q9Y345 797 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 HRH3Q9Y5N1 445 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 COMMD3-BMI1R4GMX3 469 aa19.46■□□□□ 0.71
TSPAN3-202ENST00000346495 ZC3H12DA2A288 527 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 IDH3BO43837 385 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 WISP1O95388 367 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 HTR1FP30939 366 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 MTNR1AP48039 350 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 MAP2K6P52564 334 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 RAB40BQ12829 278 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 FOXF1Q12946 379 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 PLPPR5Q32ZL2 321 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 ACER2Q5QJU3 275 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 C1orf140Q5VVS0 124 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 RNLSQ5VYX0 342 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 MAMDC2Q7Z304 686 aaPredicted RBP19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 NANOGNBQ7Z5D8 188 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 GPALPP1Q8IXQ4 340 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 WDSUB1Q8N9V3 476 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 RNFT2Q96EX2 444 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 THOC3Q96J01 351 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 TAPBPLQ9BX59 468 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 NRIP3Q9NQ35 241 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 WDR70Q9NW82 654 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 WARS2Q9UGM6 360 aaKnown RBP19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 IER3IP1Q9Y5U9 82 aa19.45■□□□□ 0.7
TSPAN3-202ENST00000346495 ANKRD33BA6NCL7 494 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 PRR23D1E9PI22 279 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 BLOC1S5-TXNDC5H3BN57 136 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 ARPC3O15145 178 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 TRMUO75648 421 aaKnown RBP19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 AHSA1O95433 338 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 RAB36O95755 333 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 LCKP06239 509 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 TSPAN19P0C672 248 aa19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 PRR23D2P0DMB1 279 aaPredicted RBP19.44■□□□□ 0.7
TSPAN3-202ENST00000346495 CCL3P10147 92 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms