RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NRIP3Q9NQ35 241 aa12.88□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NANSQ9NR45 359 aa12.88□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SAGE2PA6NJ88 616 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 BLOC1S5-TXNDC5H3BN57 136 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TAF4O00268 1085 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KHNYNO15037 678 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 EIF4E2O60573 245 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CDRT1O95170 752 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CD40LGP29965 261 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 RORCP51449 518 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MXD1Q05195 221 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GALEQ14376 348 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TOMM34Q15785 309 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CD200R1LQ6Q8B3 271 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 C16orf47Q6ZP98 133 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CENPSQ8N2Z9 138 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NFAM1Q8NET5 270 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MOSPD2Q8NHP6 518 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 METTL21AQ8WXB1 218 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KCTD7Q96MP8 289 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LRFN5Q96NI6 719 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CTRCQ99895 268 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GTPBP2Q9BX10 602 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MMP25Q9NPA2 562 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KLHL1Q9NR64 748 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HAO2Q9NYQ3 351 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KLHL21Q9UJP4 597 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PCNX3Q9H6A9 2034 aa12.87□□□□□ -0.35
CDK5RAP1-202ENST00000346416 A0A075B6Q4 140 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 VSTM2BA6NLU5 285 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CTDSP2O14595 271 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ARPC3O15145 178 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SCO2O43819 266 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NUDT14O95848 222 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 EVI2BP34910 448 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 EMP2P54851 167 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ERVK-25P63136 954 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TUBA3EQ6PEY2 450 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ATP6V1C2Q8NEY4 427 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 THAP3Q8WTV1 239 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SMAP2Q8WU79 429 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LIPHQ8WWY8 451 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TP53INP1Q96A56 240 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KTI12Q96EK9 354 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TMED9Q9BVK6 235 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 INPP5EQ9NRR6 644 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 BABAM2Q9NXR7 383 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HIF3AQ9Y2N7 669 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 OR6C70A6NIJ9 312 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GDF9O60383 454 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 FADS1O60427 444 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ONECUT2O95948 504 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 IL1AP01583 271 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 FGF9P31371 208 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 AQP2P41181 271 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TGM4P49221 684 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NRG3P56975 720 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 VASNQ6EMK4 673 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LCN10Q6JVE6 187 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SLC23A3Q6PIS1 610 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TMEM105Q8N8V8 129 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SYT14Q8NB59 555 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 OR51L1Q8NGJ5 315 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SMPDL3BQ92485 455 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SLC25A46Q96AG3 418 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 DCLRE1CQ96SD1 692 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GPX7Q96SL4 187 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NMNAT3Q96T66 252 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 C12orf10Q9HB07 376 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CRNNQ9UBG3 495 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GSTK1Q9Y2Q3 226 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NPFFR2Q9Y5X5 522 aa12.86□□□□□ -0.35
CDK5RAP1-202ENST00000346416 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 D6RAR5 112 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 MEN1O00255 615 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HNRNPCP07910 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 CLEC2LP0C7M8 214 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ASAH2BP0C7U1 165 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SDC2P34741 201 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 BDH1Q02338 343 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZNF45Q02386 682 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LTBQ06643 244 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 LPAL2Q16609 132 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 POMZP3Q6PJE2 187 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 GHDCQ8N2G8 530 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PARP16Q8N5Y8 322 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ARIH2OSQ8N7S6 290 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 NPEPL1Q8NDH3 523 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 OR5W2Q8NH69 310 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 RASD2Q96D21 266 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 ZMYND19Q96E35 227 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 SPSB2Q99619 263 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 WDR77Q9BQA1 342 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 HDHD5Q9BXW7 423 aa12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 AKIRIN1Q9H9L7 192 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 PPIEQ9UNP9 301 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP1-202ENST00000346416 IMPA2O14732 288 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms