RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 STARD4Q96DR4 205 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 RDH12Q96NR8 316 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 SAP130Q9H0E3 1048 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 RNF122Q9H9V4 155 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 BAG5Q9UL15 447 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 CLEC4AQ9UMR7 237 aa14.4□□□□□ -0.1
RAB5C-201ENST00000346213 SLC22A20A6NK97 555 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 EIF1AYO14602 144 aaKnown RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 DVL2O14641 736 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 TNFSF11O14788 317 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 H6PDO95479 791 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 CGAP01215 116 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 TFPTP0C1Z6 253 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 UQCRC1P31930 480 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 OTUD3Q5T2D3 398 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 AP1ARQ63HQ0 302 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 BHLHB9Q6PI77 547 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 C22orf34Q6ZV56 151 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 BTLAQ7Z6A9 289 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 DHRSXQ8N5I4 330 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 OR10D3Q8NH80 312 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 LZICQ8WZA0 190 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 TAMM41Q96BW9 452 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 TPD52L3Q96J77 140 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 OSBPL10Q9BXB5 764 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 GALNT8Q9NY28 637 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 ETV2O00321 342 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 CXCL13O43927 109 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 MYF6P23409 242 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 CAPGP40121 348 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 P2RX1P51575 399 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 IST1P53990 364 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 SIRPAP78324 504 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 PPP2R2BQ00005 443 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 GK3PQ14409 553 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 SHQ1Q6PI26 577 aaKnown RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF474Q6S9Z5 364 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 TMEM179BQ7Z7N9 219 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 LINC01560Q8TB33 94 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 SLC38A5Q8WUX1 472 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 RNASE6Q93091 150 aaKnown RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 RBM4BQ9BQ04 359 aaKnown RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 RBM4Q9BWF3 364 aaKnown RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 OPN3Q9H1Y3 402 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 CHST2Q9Y4C5 530 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 PCDHGB5Q9Y5G0 923 aa14.39□□□□□ -0.11
RAB5C-201ENST00000346213 MAGED1Q9Y5V3 778 aaPredicted RBP14.39□□□□□ -0.11
RAB5C-201ENST00000346213 ANKHD1Q8IWZ3 2542 aaKnown RBP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 A0A087WZY1 265 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 A0A1W2PPR1 153 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 C5orf58C9J3I9 102 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 H0YAE9 185 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 AP3D1O14617 1153 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 E2F6O75461 281 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 STX11O75558 287 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 SMNDC1O75940 238 aaKnown RBP eCLIP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 TNFAIP8O95379 198 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 IL18BPO95998 194 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 THRBP10828 461 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 UBL4AP11441 157 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 HPGDP15428 266 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 SFTPDP35247 375 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 KHKP50053 298 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 ANXA11P50995 505 aaKnown RBP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 ADARB1P78563 741 aaKnown RBP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 MYBPC1Q00872 1141 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 FGFBP1Q14512 234 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 QPRTQ15274 297 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 IFI44LQ53G44 452 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 RPS26P11Q5JNZ5 115 aaPredicted RBP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 C16orf62Q7Z3J2 963 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 MISPQ8IVT2 679 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 CNOT9Q92600 299 aaKnown RBP14.38□□□□□ -0.11
RAB5C-201ENST00000346213 ZBTB8AQ96BR9 441 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 NRBF2Q96F24 287 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 TMEM19Q96HH6 336 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 SH3GL3Q99963 347 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 SFXN3Q9BWM7 321 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 GABARAPL1Q9H0R8 117 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 LIME1Q9H400 295 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF696Q9H7X3 374 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 VNN3Q9NY84 501 aa14.38□□□□□ -0.11
RAB5C-201ENST00000346213 FAM47E-STBD1D6RA91 191 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 hCG_2039718K7EN88 272 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 ADAMDEC1O15204 470 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 SNAP29O95721 258 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 OPN1SWP03999 348 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 FPR1P21462 350 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 RPS4Y1P22090 263 aaKnown RBP14.37□□□□□ -0.11
RAB5C-201ENST00000346213 DNAJA1P31689 397 aaKnown RBP14.37□□□□□ -0.11
RAB5C-201ENST00000346213 EIF1AXP47813 144 aaKnown RBP14.37□□□□□ -0.11
RAB5C-201ENST00000346213 ZNF41P51814 821 aaPredicted RBP14.37□□□□□ -0.11
RAB5C-201ENST00000346213 EPS8Q12929 822 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 ARMC8Q8IUR7 673 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 MEIOBQ8N635 442 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 OR5W2Q8NH69 310 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 TM9SF2Q99805 663 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 MCCC2Q9HCC0 563 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 P2RX2Q9UBL9 471 aa14.37□□□□□ -0.11
RAB5C-201ENST00000346213 WDR45Q9Y484 360 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms