RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 OR52D1Q9H346 318 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 UBQLN3Q9H347 655 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 EVA1AQ9H8M9 152 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 HHATLQ9HCP6 504 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 GFOD1Q9NXC2 390 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 IGLV3-12A0A075B6K2 115 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TRAV27A0A087WT01 109 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 EFCAB7A8K855 629 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 C17orf51A8MQB3 221 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 ICOSLGO75144 302 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 REM1O75628 298 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 BCL10O95999 233 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 SP9P0CG40 484 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 SAGP10523 405 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TBXA2RP21731 343 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 GRK5P34947 590 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 GAS1P54826 345 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 CTBP2P56545 445 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 VBP1P61758 197 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 NCS1P62166 190 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 DBPQ10586 325 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 NCF4Q15080 339 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 MED22Q15528 200 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TM4SF20Q53R12 229 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 ARMCX4Q5H9R4 360 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 MEDAGQ5VYS4 303 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 CBLN3Q6UW01 205 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 RFPL4BQ6ZWI9 263 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 TMPRSS11FQ6ZWK6 438 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 THNSL2Q86YJ6 484 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 CLDN22Q8N7P3 220 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 MINDY2Q8NBR6 621 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 FAM71CQ8NEG0 241 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 BBS1Q8NFJ9 593 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 OR2T33Q8NG76 320 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 OR52I1Q8NGK6 324 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 C9orf43Q8TAL5 461 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 NDNFQ8TB73 568 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 PHOSPHO1Q8TCT1 267 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 BRIX1Q8TDN6 353 aaKnown RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF524Q96C55 264 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 HS6ST2Q96MM7 605 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF426Q9BUY5 554 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 PRDM14Q9GZV8 571 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 AKIRIN1Q9H9L7 192 aaPredicted RBP8.44□□□□□ -1.06
ATG4A-202ENST00000345734 UBQLN4Q9NRR5 601 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 RPS6KB2Q9UBS0 482 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 COPS7AQ9UBW8 275 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 B3GNT3Q9Y2A9 372 aa8.44□□□□□ -1.06
ATG4A-202ENST00000345734 EXPH5Q8NEV8 1989 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 EFCAB9A8MZ26 197 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 KDM4EB2RXH2 506 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 IDSB3KWA1 339 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 B8ZZF3 427 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 D6RAR5 112 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SCDO00767 359 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF254O75437 659 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 HEXBP07686 556 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SYPP08247 313 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 HPGDP15428 266 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 GADD45AP24522 165 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 CSTF2P33240 577 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 GPR143P51810 404 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 DCDP81605 110 aaKnown RBP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 CRYZQ08257 329 aaKnown RBP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ZSWIM7Q19AV6 140 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 FAM69BQ5VUD6 431 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 HLA-DQA1Q5Y7H0 255 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ULK3Q6PHR2 472 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SHFQ7M4L6 423 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ZNF367Q7RTV3 350 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ANKRD37Q7Z713 158 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 PPP1R3BQ86XI6 285 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SLC34A3Q8N130 599 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ZBTB44Q8NCP5 570 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 OR51A7Q8NH64 312 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 WFDC12Q8WWY7 111 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 LGALS12Q96DT0 336 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 RNFT2Q96EX2 444 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ART5Q96L15 291 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 PSMG3-AS1Q96PY0 264 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 HOXD1Q9GZZ0 328 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ARRDC1-AS1Q9H2J1 176 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SIGLEC7Q9Y286 467 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 SLC35A3Q9Y2D2 325 aa8.43□□□□□ -1.06
ATG4A-202ENST00000345734 LSM2Q9Y333 95 aaKnown RBP8.43□□□□□ -1.06
ATG4A-202ENST00000345734 ARPC4-TTLL3A0A0A6YYG9 625 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 LRRN3E7EW58 273 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 NTN3O00634 580 aaPredicted RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 BHLHE40O14503 412 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 GMFGO60234 142 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 PTP4A3O75365 173 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CSO75390 466 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CLK1P49759 484 aaKnown RBP8.42□□□□□ -1.06
ATG4A-202ENST00000345734 CCR4P51679 360 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 DCAF7P61962 342 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 PLCXD2Q0VAA5 305 aa8.42□□□□□ -1.06
ATG4A-202ENST00000345734 SKP2Q13309 424 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms