RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 B3GALT1Q9Y5Z6 326 aa18.19■□□□□ 0.5
RTN1-202ENST00000342503 WDFY4Q6ZS81 3184 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 C2orf72A6NCS6 295 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SLC22A31A6NKX4 558 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 KLF7O75840 302 aaPredicted RBP18.18■□□□□ 0.5
RTN1-202ENST00000342503 CPEP16870 476 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 AQP2P41181 271 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SERPINB10P48595 397 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SLC16A1P53985 500 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 PRPS1P60891 318 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TUBA1BP68363 451 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 COL28A1Q2UY09 1125 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 LYPD8Q6UX82 237 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TUBA1AQ71U36 451 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 NUP54Q7Z3B4 507 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 NAXDQ8IW45 347 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 PHC2Q8IXK0 858 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 ZNF485Q8NCK3 441 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SDR9C7Q8NEX9 313 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 KBTBD8Q8NFY9 601 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TM9SF4Q92544 642 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TAAR8Q969N4 342 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 DEFB126Q9BYW3 111 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 PLGRKTQ9HBL7 147 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 NRIP3Q9NQ35 241 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TAS2R10Q9NYW0 307 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 FBXL4Q9UKA2 621 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 HIF3AQ9Y2N7 669 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SPIN1Q9Y657 262 aaPredicted RBP18.18■□□□□ 0.5
RTN1-202ENST00000342503 CPAMD8Q8IZJ3 1885 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 WDR87Q6ZQQ6 2873 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 BLOC1S5-TXNDC5H3BN57 136 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TSPAN19P0C672 248 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 ASAH2BP0C7U1 165 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 RPS5P46782 204 aaKnown RBP18.18■□□□□ 0.5
RTN1-202ENST00000342503 ERVK-25P63136 954 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 BTBD16Q32M84 506 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 DCAF12Q5T6F0 453 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 OR5M10Q6IEU7 315 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 KLHL36Q8N4N3 616 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 TMEM99Q8N816 258 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 LRRC75AQ8NAA5 344 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 OR9Q1Q8NGQ5 310 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 ELP5Q8TE02 316 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 GPX7Q96SL4 187 aaPredicted RBP18.18■□□□□ 0.5
RTN1-202ENST00000342503 ARHGAP9Q9BRR9 750 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SLIRPQ9GZT3 109 aaKnown RBP18.18■□□□□ 0.5
RTN1-202ENST00000342503 KLHL1Q9NR64 748 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 SEC14L4Q9UDX3 406 aa18.18■□□□□ 0.5
RTN1-202ENST00000342503 IGHV1-45A0A0A0MS14 117 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 TMED7-TICAM2A0A0A6YYA0 188 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 ARPC3O15145 178 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 OR2J2O76002 312 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 GYPBP06028 91 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 CRYBB2P43320 205 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 POLR2HP52434 150 aaKnown RBP18.17■□□□□ 0.5
RTN1-202ENST00000342503 ZNF791Q3KP31 576 aaPredicted RBP18.17■□□□□ 0.5
RTN1-202ENST00000342503 OR2Y1Q8NGV0 311 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 RNF138Q8WVD3 245 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 TTC9Q92623 222 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 KATNB1Q9BVA0 655 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 STRADBQ9C0K7 418 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 ZNF700Q9H0M5 742 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 GALNT9Q9HCQ5 603 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 STUB1Q9UNE7 303 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 TMED7Q9Y3B3 224 aa18.17■□□□□ 0.5
RTN1-202ENST00000342503 TMEM72A0PK05 275 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 C12orf71A8MTZ7 269 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 GALR2O43603 387 aaPredicted RBP18.16■□□□□ 0.5
RTN1-202ENST00000342503 BGLAPP02818 100 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 COX6A1P12074 109 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 PSMA1P25786 263 aaKnown RBP18.16■□□□□ 0.5
RTN1-202ENST00000342503 OPRL1P41146 370 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 BMXP51813 675 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 CLDN6P56747 220 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 C17orf67Q0P5P2 114 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 OR52N1Q8NH53 320 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 SLC22A8Q8TCC7 542 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 SPRYD4Q8WW59 207 aaPredicted RBP18.16■□□□□ 0.5
RTN1-202ENST00000342503 RASD2Q96D21 266 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 EXOSC4Q9NPD3 245 aaKnown RBP18.16■□□□□ 0.5
RTN1-202ENST00000342503 ZNF229Q9UJW7 825 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 HS3ST3B1Q9Y662 390 aa18.16■□□□□ 0.5
RTN1-202ENST00000342503 TRAV36DV7A0A075B6V5 113 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 PMS2P1A4D2B8 440 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 ANKUB1A6NFN9 424 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 B4DXG7 233 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 IDH3BO43837 385 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 SUSD5O60279 629 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 CBFA2T3O75081 653 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 SLC25A12O75746 678 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 STK17BO94768 372 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 CELA2AP08217 269 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 MRPL3P09001 348 aaKnown RBP18.15■□□□□ 0.5
RTN1-202ENST00000342503 UQCRC1P31930 480 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 RAB15P59190 212 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 INSM1Q01101 510 aaPredicted RBP18.15■□□□□ 0.5
RTN1-202ENST00000342503 TPBGQ13641 420 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 ISXQ2M1V0 245 aa18.15■□□□□ 0.5
RTN1-202ENST00000342503 ALG10Q5BKT4 473 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms