RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 PRORSD1PA6NEY8 169 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 M0QX08 132 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 DYNC1I1O14576 645 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 TPST2O60704 377 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 CCDC22O60826 627 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 RAMP1O60894 148 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 NPIPB7O75200 414 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 SERPINB7O75635 380 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 POU2F1P14859 743 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 CXCR1P25024 350 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 EDNRAP25101 427 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 ADAM8P78325 824 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 RASGEF1BQ0VAM2 473 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 BNIP2Q12982 314 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 VMACQ2NL98 169 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 TMEM201Q5SNT2 666 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 FBXW10Q5XX13 1052 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 C6orf89Q6UWU4 347 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 TFAP2EQ6VUC0 442 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 C22orf34Q6ZV56 151 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 ARMC8Q8IUR7 673 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 LSMEM1Q8N8F7 131 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 GPR32P1Q8NGA4 272 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 RP9Q8TA86 221 aaKnown RBP13.67□□□□□ -0.22
VAPA-201ENST00000340541 RCN3Q96D15 328 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 DACH2Q96NX9 599 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 TACO1Q9BSH4 297 aaKnown RBP13.67□□□□□ -0.22
VAPA-201ENST00000340541 PRR14Q9BWN1 585 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 POTEKPQ9BYX7 375 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 MYLK2Q9H1R3 596 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 USP22Q9UPT9 525 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 TESMINQ9Y4I5 508 aa13.67□□□□□ -0.22
VAPA-201ENST00000340541 SH3D21A4FU49 640 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 GMNCA6NCL1 334 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 ZNF724A8MTY0 619 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 C16orf97H3BN30 126 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 SNX3O60493 162 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 OPN1SWP03999 348 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 OR2B6P58173 313 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 FOXD4Q12950 439 aaPredicted RBP13.66□□□□□ -0.22
VAPA-201ENST00000340541 PDK3Q15120 406 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 DUSP7Q16829 419 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 EXOC3L2Q2M3D2 409 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 DEFB113Q30KQ7 82 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 STAC2Q6ZMT1 411 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 CCDC80Q76M96 950 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 CCDC103Q8IW40 242 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 SLC30A8Q8IWU4 369 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 GABRG1Q8N1C3 465 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 SMYD1Q8NB12 490 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 BHLHE22Q8NFJ8 381 aaPredicted RBP13.66□□□□□ -0.22
VAPA-201ENST00000340541 TAMM41Q96BW9 452 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 ZNF583Q96ND8 569 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 WFIKKN1Q96NZ8 548 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 ARHGDIGQ99819 225 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 SH3GL1Q99961 368 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 FAM107BQ9H098 131 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 PIF1Q9H611 641 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 PLEKHF2Q9H8W4 249 aa13.66□□□□□ -0.22
VAPA-201ENST00000340541 PRR14LQ5THK1 2151 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 LIPT2A6NK58 231 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 A8MVM7 634 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 ATE1O95260 518 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 LGI1O95970 557 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 COX4I1P13073 169 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 HOXB4P17483 251 aaPredicted RBP13.65□□□□□ -0.22
VAPA-201ENST00000340541 CD247P20963 164 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 FPR1P21462 350 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 NTF4P34130 210 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 IDUAP35475 653 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 OR3A2P47893 321 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 KCNJ5P48544 419 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 SLC16A1P53985 500 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 SLC35A1P78382 337 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 EGR4Q05215 589 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 KEAP1Q14145 624 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 C8orf82Q6P1X6 216 aaPredicted RBP13.65□□□□□ -0.22
VAPA-201ENST00000340541 BEND4Q6ZU67 534 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 PATL1Q86TB9 770 aaKnown RBP13.65□□□□□ -0.22
VAPA-201ENST00000340541 OR52E4Q8NGH9 312 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 ZNF775Q96BV0 537 aaPredicted RBP13.65□□□□□ -0.22
VAPA-201ENST00000340541 ZHX1-C8orf76Q96EF9 292 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 TRIM2Q9C040 744 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 C12orf10Q9HB07 376 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 GID8Q9NWU2 228 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 KLHL28Q9NXS3 571 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 TESQ9UGI8 421 aaKnown RBP13.65□□□□□ -0.22
VAPA-201ENST00000340541 ACANP16112 2415 aa13.65□□□□□ -0.22
VAPA-201ENST00000340541 IGKV1D-42A0A075B6H8 117 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 SIAH2O43255 324 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 EIF1BO60739 113 aaKnown RBP13.64□□□□□ -0.23
VAPA-201ENST00000340541 FZD7O75084 574 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 C8BP07358 591 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 HOXC12P31275 282 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 P2RY4P51582 365 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
VAPA-201ENST00000340541 GNGT1P63211 74 aa13.64□□□□□ -0.23
VAPA-201ENST00000340541 CEACAM7Q14002 265 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms