RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PRKAG1P54619 331 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
NECAP1-201ENST00000339754 PDZK1IP1Q13113 114 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 CDK5R1Q15078 307 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 TP53I3Q53FA7 332 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 TMEM69Q5SWH9 247 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 KHDRBS2Q5VWX1 349 aaKnown RBP8.67□□□□□ -1.02
NECAP1-201ENST00000339754 FAM109BQ6ICB4 259 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-201ENST00000339754 GLB1LQ6UWU2 654 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 USP53Q70EK8 1073 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 HSD11B1LQ7Z5J1 315 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 RTN4RL1Q86UN2 441 aaPredicted RBP8.67□□□□□ -1.02
NECAP1-201ENST00000339754 FAM129CQ86XR2 697 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 CFAP206Q8IYR0 622 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 LNX2Q8N448 690 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 SYNPRQ8TBG9 265 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 ASB13Q8WXK3 278 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 SMIM19Q96E16 107 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 PHYHIPLQ96FC7 376 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 C16orf58Q96GQ5 468 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 SLC41A3Q96GZ6 507 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 CAPNS2Q96L46 248 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 AMDHD1Q96NU7 426 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 TMEM185BQ9H7F4 350 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 C14orf105Q9NVL8 296 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 MIOXQ9UGB7 285 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 OR5V1Q9UGF6 321 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 FBXL4Q9UKA2 621 aa8.67□□□□□ -1.02
NECAP1-201ENST00000339754 MTCL1Q9Y4B5 1905 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TRBV23-1A0A0A0MS06 115 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 COLCA2A8K830 154 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 BNIP3LO60238 219 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 CTSAP10619 480 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 CST5P28325 142 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 MNDAP41218 407 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 SLC16A1P53985 500 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 UBE2E3Q969T4 207 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 HAVCR1Q96D42 359 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 PELI1Q96FA3 418 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 ARL5BQ96KC2 179 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 ZCCHC2Q9C0B9 1178 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 ZNF334Q9HCZ1 680 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 NOX4Q9NPH5 578 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 POT1Q9NUX5 634 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 DHCR7Q9UBM7 475 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 DENND4CQ5VZ89 1909 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 COL4A3Q01955 1670 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TRAPPC13A5PLN9 417 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 UNC119BA6NIH7 251 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 OR6C76A6NM76 312 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TO15178 435 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 GREM1O60565 184 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 LATS1O95835 1130 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 ACTL6AO96019 429 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 HMGN2P05204 90 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 S100A9P06702 114 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 RAB40ALP0C0E4 278 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 HMGA1P17096 107 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 PTAFRP25105 342 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 S100PP25815 95 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TAS2R20P59543 309 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 FOXK2Q01167 660 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 STX4Q12846 297 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 LASP1Q14847 261 aaKnown RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 AGERQ15109 404 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 H3F3CQ6NXT2 135 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 C3orf33Q6P1S2 294 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TMEM71Q6P5X7 295 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 Q6ZVL8 140 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 FAM122BQ7Z309 247 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 SKA3Q8IX90 412 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 AMER3Q8N944 861 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 CHST14Q8NCH0 376 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 OR4C16Q8NGL9 310 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 OR6N1Q8NGY5 312 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 PHOSPHO1Q8TCT1 267 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 RAB40AQ8WXH6 277 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 ZNF764Q96H86 408 aaPredicted RBP8.66□□□□□ -1.02
NECAP1-201ENST00000339754 MCHR1Q99705 422 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TTTY10Q9BZA0 68 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 IL21RQ9HBE5 538 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TMEM138Q9NPI0 162 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 CMC2Q9NRP2 79 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 TNFSF18Q9UNG2 199 aa8.66□□□□□ -1.02
NECAP1-201ENST00000339754 UBE2CO00762 179 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 BCL2L11O43521 198 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 ICOSLGO75144 302 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 CD8AP01732 235 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 RPLP2P05387 115 aaKnown RBP8.65□□□□□ -1.02
NECAP1-201ENST00000339754 CKBP12277 381 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 FOLR2P14207 255 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 CBR1P16152 277 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 MAKP20794 623 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 NFYBP25208 207 aa8.65□□□□□ -1.02
NECAP1-201ENST00000339754 PBLDP30039 288 aaPredicted RBP8.65□□□□□ -1.02
NECAP1-201ENST00000339754 AGTR1P30556 359 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms